Gene Sros_5188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5188 
Symbol 
ID8668482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand+ 
Start bp5704436 
End bp5705086 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content72% 
IMG OID 
ProductGntR family transcriptional regulator 
Protein accessionYP_003340707 
Protein GI271966511 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.948488 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0144297 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAACG TCACGGCTCC GCTGCGGCGC GACATCGCGG AGCAGGTCAC CGCGCGCATC 
CTGGACGGTC GCCTGCCTGC CGAGGGGCGC GTCAACGAGG TCCGCCTCGC GGCCGAGCTG 
GGGGTCAGCC GTACGCCGCT GAGGGAGGCG CTCGTGGAGC TCACCGACCG CGGCCTGCTG 
GTCGCCGAGC CGCGGCGTGG CTTCCGCGTG CCGCCCTTGG ACCTCGACGA GGCCCGCAAG 
CTGTATCCGC TGGTGGGCGA GTTGGAGGCC CTCGCCCTGC GGTGGACCGC GCCGCAGGAC 
CTGCTCGGGC TCACCAACCG GCTGGAGGAG CAGATCGACG AGATGCAGGC CGCCCTGGAG 
CAGGGTGAGG AGCTGGCCGC GCTCGACGAC CGCTGGCACG CCCTGTTGCT CTCGGCCTGT 
GCCAACGCCC ACCTCATGCG GCTCATCGTC CAGACGAAGC CCCTGCTCAA GCGCTACGAC 
GTGCTCTATT TCGGCGGCCC CGACCGGGCC CGGCGCAGCA TCGACGAGCA CCGCCGCATC 
CTCGCCGCGA TCCGCGAGGG AGACCTCACC GAGGGAGCGC GATGGCTCGT TCAGAACTGG 
GTCAACGGAG CCGCCTACCT CGGCCAGGAC CCTCGCCGGT CCTCCCGGTA G
 
Protein sequence
MDNVTAPLRR DIAEQVTARI LDGRLPAEGR VNEVRLAAEL GVSRTPLREA LVELTDRGLL 
VAEPRRGFRV PPLDLDEARK LYPLVGELEA LALRWTAPQD LLGLTNRLEE QIDEMQAALE 
QGEELAALDD RWHALLLSAC ANAHLMRLIV QTKPLLKRYD VLYFGGPDRA RRSIDEHRRI 
LAAIREGDLT EGARWLVQNW VNGAAYLGQD PRRSSR