| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_5186 |
|---|
| Symbol | |
|---|
| ID | 8668480 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 5702107 |
|---|
| End bp | 5703114 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | putative AraC-like transcription regulator |
|---|
| Protein accession | YP_003340705 |
|---|
| Protein GI | 271966509 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0167126 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACGTAC TCAGCGACGT GATCGCCGCG ATACGCGCCG GAGAACCCCG CTCGGCGCGC
GTTCAGTGGC ACGCCCCCTG GGGGCAGCGG TTCCCCACCG TGCGCGGCTC CGCCGGCTTT
CAAGTGGTCC TGCAGGGATC GTGCCGGCTG ATCCCCCCGG ACGGCGGCAC CCCCATCGCG
CTGAACGTCG GCGACGTGGT GTTCCTGCCC CACGGAAGCG GCTACGCGCT GGCCGACAGC
CCCGCCACCC CGCTGACCGA ACCCGCCTGC GACCCACTGA ACGACCCTCG GTTCGAAGAC
CGCTACGCCT CCGCGACCGT GGGGAAGACC GGACAGGACG GCTCGCAGGC GGTCACCGTG
ACCCTCTGCG GTGGATACCA GCTCGACCCC AGCCGAGCCC ATCCGCTCCT GGGCGACCTG
CCCGAGATCG TCCACCTGCC CGCCCGCCTC GGGCACCGCC CCGAACTGCG CGCCGCCGTC
GACCTCCTCG GCGGCGAGCT CGACAACCCC CGCCTCGGCG TGGACACCAT CGTGCCCGCC
CTGCTCGACA TGCTGCTGCT CTACATCCTG CGCGCCTGGT TCGACGAACA GTCCGAACGC
GGCACGACCG CCGGCTGGGC CGCGGCACTG GGCGACCCGG CGATCAGCGC CGCACTGCAC
GCCCTCCACC GTGACCCCGC ACTCCCCTGG ACGGTCGAGA CACTCGGCAC CCAGGCGGGA
CTGTCCAGGG CGGCTTTCTC CCGGCGCTTC ACCACTCTGA TCGGCCAGCC GCCCCTCACC
TATCTGACCT GGTGGCGCAT GACCACCGCA GCCCGGCTTC TCCGCGAGTC CGACGCCCCG
CTCGGCGAGG TGGCCACCCG GATCGGCTAC ACCTCGGAGT TCGCCTTCGC CACCGCCTTC
AAGCGGGAGT ACGGCATCGC ACCCGGCAAG TACCGCCGAC AGAGCCGAGC GGAAACCCGG
AGCGGTGAAC TCGACGCGAT GGCACCACGA CCAGTGGTCA CTCCGTAA
|
|---|
| Protein sequence | MDVLSDVIAA IRAGEPRSAR VQWHAPWGQR FPTVRGSAGF QVVLQGSCRL IPPDGGTPIA
LNVGDVVFLP HGSGYALADS PATPLTEPAC DPLNDPRFED RYASATVGKT GQDGSQAVTV
TLCGGYQLDP SRAHPLLGDL PEIVHLPARL GHRPELRAAV DLLGGELDNP RLGVDTIVPA
LLDMLLLYIL RAWFDEQSER GTTAGWAAAL GDPAISAALH ALHRDPALPW TVETLGTQAG
LSRAAFSRRF TTLIGQPPLT YLTWWRMTTA ARLLRESDAP LGEVATRIGY TSEFAFATAF
KREYGIAPGK YRRQSRAETR SGELDAMAPR PVVTP
|
|---|
| |