Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5185 |
Symbol | |
ID | 8668479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 5700223 |
End bp | 5701977 |
Gene Length | 1755 bp |
Protein Length | 584 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | NADPH:quinone reductase and related Zn-dependent oxidoreductase-like protein |
Protein accession | YP_003340704 |
Protein GI | 271966508 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0220056 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGGAGC AACGCAGGAT TCTGGTGACC GGGGCGACCG GCACGGTCGG CCGGCAGGTC GTGGCACAGC TGCTGGAGGC GGGGGCCGGG GTCCGTGCGC CGGCCCGCGA TCCCGAGGCG GCCGGCCTTC CGGACGGCGT CGAGGTCGTG CGGGGCGACC TGGCCGATCC GGACACCCTG CACGCGTCCC TGAACGGGGT CGAGGCCGTG TTTCTCCTCT GGCCGTTCGC TACGGCCGAG GGGATGCCCG CGGTTCTGGA TGTGATCGCC ACGCATGCCC GCCGCATCGT CTACCTGTCC TCGGCGGCCG TACGCGGCTA CGAACGGCAG GTCGAGCAGC TGATCGAGCG GTCCGGGCTG GAATGGACGT TCCTGCGACC GCACGCCTTC GCGGCCAACG CCCTGCGGTG GGCCGGGCAG ATCCGCGCCG AGGCAGCCGT GCGCGGACCG TACGGCGCGG CCGCCATGCC CCCGCTGCAC GAGCGGGATC TGGCCGCGGT CGCGGTGCGC GCACTCGTCG GCGACGGGCA CAACGGCGCG ATCTACGAGC TGACCGGGCC CGAGACACTG ACCCAGGCCG AACAGGTGGG CATCATCGGG GAGGTGATCG GCCGCCCGGT GCGCTGGGAG GAGACCTCGC CGCAGACCGC GCGGCAGCGG ATGCTCACCC AGGGCTGGCC GCCCGCGGCC GTGGACGGCA TCCTCCAGGC CCAGGCCGAG ATGGTGACCG TACCAAGAGC GGCCACGGCC ACGGTGGGAG AGGTCACCGG AGTCCCGGCC CGCACGTTCC GCACCTGGGT GAACGACCAC GCGGGCGAGT TCCGCGACAC CATGAAGGCC GCCCGCATCC ATGAGTACGG CGATGCCTCC GTCATCCGAT ACGAAGAAGT GCCGCGGCCC GCGCCCGGAC CGGGCGAGGT CCTGATCCGG GTCGCCGCCA CCTCGTTCAA TCCTTCGGAA ACGGCGCTGC GGTCGGGGAT GCTGCGAGCC GTGCTGCCGG TGGACCTGCC CTACATCCTC GGATGGGACG TCTCCGGCAC GATCGCCGAG GTCGGCGACG ATGTGGAGGG GCTGGCCGTG GGCGACCGGG TCATCGGCCG TCTCGACGCG GGCGGCGCCG CGGCCGAGTA CGTCGCCGCC CCGGCCGGCG TGCTGGCCAA GGCGCCCGCC ACCGTTCCCC TGGCCGACGC GGCCGCGATC CCCGTCGCCG CGCTCACCGC CTGGCAGGTG CTGTTCGAGC ACGCCCGCAT CACCGCGGGC CGGCGCGTGC TCATCAACGG CGCCGGTGGC GGCGTGGGAG TGTTCGCCGT CCAGCTCGCC AGGCACGCCG GTGCGACAGT CATCGCTACG GCCGGCGGCC GCAGCGCCGC GGCGGTCCGC GAGTACGGTG CCGACCAGAT CATCGACTAC ACGACCACCG CTCTCGCAGA CGCGCTGGAC GGTCCGGTCG ATGCCGTCGT CAACCTCGCT CCGATCTCTC CCGAGGCCGC GGTGAGCCTG GTCTCCCTCC TGCGGCCGGG CGGCGTCATC GCCTCCGTCG CCACCCCCGT CGAGCCGCCC GCCGACGCCG ATGTCACCGC CCTGCACATG GTCGCCCGCA ACGACGCCAA GCAACTGGGT GAGATCGTCG AACTCCTCGA CGCCGGCGCG CTCGTCGTCG ACGTCGCCGA ATCCCACCCG CTGTCCGACC TCGCGCTGGT CCACCGCAGG AGCGAGGCGG GCCAGACCCG CGGAAAGATC ATCCTCTTCC CCTGA
|
Protein sequence | MPEQRRILVT GATGTVGRQV VAQLLEAGAG VRAPARDPEA AGLPDGVEVV RGDLADPDTL HASLNGVEAV FLLWPFATAE GMPAVLDVIA THARRIVYLS SAAVRGYERQ VEQLIERSGL EWTFLRPHAF AANALRWAGQ IRAEAAVRGP YGAAAMPPLH ERDLAAVAVR ALVGDGHNGA IYELTGPETL TQAEQVGIIG EVIGRPVRWE ETSPQTARQR MLTQGWPPAA VDGILQAQAE MVTVPRAATA TVGEVTGVPA RTFRTWVNDH AGEFRDTMKA ARIHEYGDAS VIRYEEVPRP APGPGEVLIR VAATSFNPSE TALRSGMLRA VLPVDLPYIL GWDVSGTIAE VGDDVEGLAV GDRVIGRLDA GGAAAEYVAA PAGVLAKAPA TVPLADAAAI PVAALTAWQV LFEHARITAG RRVLINGAGG GVGVFAVQLA RHAGATVIAT AGGRSAAAVR EYGADQIIDY TTTALADALD GPVDAVVNLA PISPEAAVSL VSLLRPGGVI ASVATPVEPP ADADVTALHM VARNDAKQLG EIVELLDAGA LVVDVAESHP LSDLALVHRR SEAGQTRGKI ILFP
|
| |