Gene Sros_5183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5183 
Symbol 
ID8668477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5698604 
End bp5699242 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content69% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003340702 
Protein GI271966506 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0142854 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGAAGA TCGTCGACCA CGGGCAACGG CGGGACGAGT TCGTCCGCGC CGTATGGGAG 
GTCATCAGCC GGGAAGGGGT CGAGGGCGCC ACGGTCCGCA AGGTCGCCGA GGCGGCGGGA
GTCTCGGTCG GCGGGCTGCG CCACTATTTC GACACCCAGC GCGGCCTGCT CAGCTTCGCG
GCGCAGGCGG TCGGGAGGAG TGTCGCCAAG CGCATCGCCG GGCATCTGCA TACGGACCTG
CCGGGTGCGG AGCGCGCTCA GCTCCTGCTC GAAGAGCTCC TCCCGCTGGA TGAGAACCGC
CGCGTCGAGG TGGACGTATG GCTGGCGTGC CTGGTGCGCT CACATGTCGA TGAGTCGCTG
GCGGAGTTGC GCAGCACGAG CTGGGCGGGC GAACGGTACA TCTGCCGCCT CGCAATCGCC
TCCTGCCACG ACATGCCGCT TCCGGAGCGC ATGGACCAGG AGTTCGCGGA CGCCGATCTG
GAACGGCAGG CCATGCGGCT CCACCTGTTC GTTGACGGCC TGACGCTGCA AACGGCGACG
TACCCGCAGA GATTCACGCC GCGGGGCATT CGCGCGACCG TCCGCGACGA ACTGCGCCTC
CTGACCGGGA CACCCCCCGG ATCACCCCGG TCCGGCTGA
 
Protein sequence
MPKIVDHGQR RDEFVRAVWE VISREGVEGA TVRKVAEAAG VSVGGLRHYF DTQRGLLSFA 
AQAVGRSVAK RIAGHLHTDL PGAERAQLLL EELLPLDENR RVEVDVWLAC LVRSHVDESL
AELRSTSWAG ERYICRLAIA SCHDMPLPER MDQEFADADL ERQAMRLHLF VDGLTLQTAT
YPQRFTPRGI RATVRDELRL LTGTPPGSPR SG