Gene Sros_5178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5178 
Symbol 
ID8668472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5691949 
End bp5692542 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content73% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003340697 
Protein GI271966501 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.519918 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00157317 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCCCGC GCAAGTCCGT CATCGAAACG GCCGCCACCC GCACCCGCAT CATCGAGTGC 
GCCCTGGCCT CGGCCTCGGC CGAAGGCCTG GAAGGTGTCA CGATCGGCCG CCTGGCCGGC
GAGCTGGCCA TGAGCAAGGC CGGAGTGATC GGCCACTTCG GCACCAAGGA GGTCCTGCAA
CTGGCCGTCC TCGACACCGC CGTCGACAGG TTCGTCCGGC GGGTGCCCGC GCGGGTGGTG
GGCGCGCGGC CGGGCGCCGA ACGGCTGGCG CGCGCGTTCG GCGAGTGGTT CGACTACATG
GCCGACGACC ACAGGGGCTG CTTCCTCACC TCGGTCGCCA CCGAGTTCGA CGACCGCCCC
GGCCCGGTCA GGGACGCCGT CATCGCCGCC CTGTCCCGAT GGTCGGCCTA CGTCCTGGAC
GAGCTCGGCA CCGCCGTCGA CTCCGGCGAG CTTCCCCGCG ACACCGACCC CGACCAGCTC
GCCTTCGAGC TCAACGGCGT CGCCCTGGCC ACCGCGCAGG CCGTACAACT GCACCACGAC
CCGCTGGCCG CCACCCGCGC CCGCCGCGCG CTGGCCCGCC TCCTGCCCCC GTAA
 
Protein sequence
MSPRKSVIET AATRTRIIEC ALASASAEGL EGVTIGRLAG ELAMSKAGVI GHFGTKEVLQ 
LAVLDTAVDR FVRRVPARVV GARPGAERLA RAFGEWFDYM ADDHRGCFLT SVATEFDDRP
GPVRDAVIAA LSRWSAYVLD ELGTAVDSGE LPRDTDPDQL AFELNGVALA TAQAVQLHHD
PLAATRARRA LARLLPP