Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5178 |
Symbol | |
ID | 8668472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 5691949 |
End bp | 5692542 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | putative transcriptional regulator, TetR family |
Protein accession | YP_003340697 |
Protein GI | 271966501 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.519918 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00157317 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCCCGC GCAAGTCCGT CATCGAAACG GCCGCCACCC GCACCCGCAT CATCGAGTGC GCCCTGGCCT CGGCCTCGGC CGAAGGCCTG GAAGGTGTCA CGATCGGCCG CCTGGCCGGC GAGCTGGCCA TGAGCAAGGC CGGAGTGATC GGCCACTTCG GCACCAAGGA GGTCCTGCAA CTGGCCGTCC TCGACACCGC CGTCGACAGG TTCGTCCGGC GGGTGCCCGC GCGGGTGGTG GGCGCGCGGC CGGGCGCCGA ACGGCTGGCG CGCGCGTTCG GCGAGTGGTT CGACTACATG GCCGACGACC ACAGGGGCTG CTTCCTCACC TCGGTCGCCA CCGAGTTCGA CGACCGCCCC GGCCCGGTCA GGGACGCCGT CATCGCCGCC CTGTCCCGAT GGTCGGCCTA CGTCCTGGAC GAGCTCGGCA CCGCCGTCGA CTCCGGCGAG CTTCCCCGCG ACACCGACCC CGACCAGCTC GCCTTCGAGC TCAACGGCGT CGCCCTGGCC ACCGCGCAGG CCGTACAACT GCACCACGAC CCGCTGGCCG CCACCCGCGC CCGCCGCGCG CTGGCCCGCC TCCTGCCCCC GTAA
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Protein sequence | MSPRKSVIET AATRTRIIEC ALASASAEGL EGVTIGRLAG ELAMSKAGVI GHFGTKEVLQ LAVLDTAVDR FVRRVPARVV GARPGAERLA RAFGEWFDYM ADDHRGCFLT SVATEFDDRP GPVRDAVIAA LSRWSAYVLD ELGTAVDSGE LPRDTDPDQL AFELNGVALA TAQAVQLHHD PLAATRARRA LARLLPP
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