| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_5175 |
|---|
| Symbol | |
|---|
| ID | 8668469 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 5689255 |
|---|
| End bp | 5689872 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | putative transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003340694 |
|---|
| Protein GI | 271966498 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0125916 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.00846982 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGACC AGCACTCAAC ACTGCGAGCG CAACGACGAG CCGAGACGCA GCGCATGATT
CAGGCGCACG CGGTACGGCT GTTCACCGGG CGCGGATACG ACGCCACGAC CGTGACCGAC
GTCGCCGAAG CCGCGGGCGT GTCGCCCATG ACCGTGTACC GGCACTTCCC CACGAAAGAG
GACCTCGTGC TCGTCGACCA GCACGGTCGG CTCGTCGCCG AGCGGATCGT CGCGTCGTCC
GCCGCGCAGC CCCTGGTCCG CCGCATCGGC GGCGCGCTCA TCGACTCGGC CGCGACGTTG
ACCGGTGGCG GCCACGGAGA CGACACGGAG GCGGGCAAGC AGTTCCTGCT CGCCCGCCTC
CGGCTCATGA TCTCGACGCC GGCCTTGCGG GCCAAGCACC TGGACAACCA CTACGCCCTT
CAGCAGGCGA TCGTCGATGC CCTCGGGGAC GATGCCGCCG ATCCCGACAC GGCGTTCCGG
GCCCAGGTGG CGGCCAGTGC CTGCCTGGCC GCCCTGCACG CGGCATTGGT GCGCTGGGCC
GAGGACGACG GGCGGACCGA GCTGCCCGAC GTGATCGCGA AGGCGCTCGC CGCCGCCTTC
GGCGATGACA TCGTCTGA
|
|---|
| Protein sequence | MPDQHSTLRA QRRAETQRMI QAHAVRLFTG RGYDATTVTD VAEAAGVSPM TVYRHFPTKE
DLVLVDQHGR LVAERIVASS AAQPLVRRIG GALIDSAATL TGGGHGDDTE AGKQFLLARL
RLMISTPALR AKHLDNHYAL QQAIVDALGD DAADPDTAFR AQVAASACLA ALHAALVRWA
EDDGRTELPD VIAKALAAAF GDDIV
|
|---|
| |