| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_5167 |
|---|
| Symbol | |
|---|
| ID | 8668461 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 5681962 |
|---|
| End bp | 5683215 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | low temperature requirement A protein (LtrA) family protein |
|---|
| Protein accession | YP_003340688 |
|---|
| Protein GI | 271966492 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.27425 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0220056 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCACCAG CCGGCACCAC CATCCGAATC CGCGGCCGGA TGAGCGCCCG TCCCATCGAC
GAGCCGCACC GCGCATCGAG CCAGCTTGAG CTCCTGTTCG ACCTCACCTT CGTGGTCGCG
GTCGCGGCCG TCACCGCCCA GCTCGCGCAC GGCATCGCGG ACGGTCATGG ACTCGCCGGA
CTGATCCCGT TCCTGCAGGT GTTCTTCGCG ATCTGGTGGG CGTGGATGAA CTTCACGTGG
TTCGCCTCGT CCTACGACAC CGACGATGTC GCCTACCGGC TGCTGACCAT GGTGCAGATG
GCCGGCGTAC TGGTCCTTGC CGCCGGTGTG CCTGCCGCGG CCGGTCACGC CGATTACGGT
GTCGTCACGC TGGGCTACCT CATCATGAGG ATCGGTCTCG TCGCCCAGTG GTTGCGGGCC
GGTCTCGAGG ACCCGGCGAG CCGTCGCACC GCGCTGCGCT ACGCCGCCGG CATCACCGTC
GTGCAGATGG GCTGGGTGCT CCGCCTCTTC CTGGCAGATG CGGGCGTCCT GCCCTCATCC
TCCCAGCTGC CGTTGTTCGC CTGCCTGGTC GTCTTGGAAC TCGCGGTGCC ACGGTGGGCG
GAGCGGGCCA GGGCCACCAA CTGGCACCCG CACCACATCG CCGAGCGCTA CGGCCTGTTC
ACGATCATTC TGCTCGGTGA GAGTGTCCTG GCCGCGAGCA GAGGAGTCGA AAAGGCGCTC
GAAGCGGACC AGATCAGTGG CCCGTTCGTC GTCATCGCCG GCTGCGGCCT CGTCCTGCTG
TTCGCTCTTT GGTGGCTGTA CTTCCTCGTA CCGGCGGGGG AAGGTCTCAG TGACCGCCGC
CATCGGTCCT ACCTGTGGGG TTACAGCCAC TACGGCATCT TCGCGGCGCT GGCGGCCCTC
GGCGCCGGGC TCGAGGTGGC GGTGGAGCAG AGCGGGCACG ACGTTGCGGC ATCACCGCTG
GTACTCGGCT ACGCCGTCGC CATCCCGGTC GGCCTGTATC TCGCCCTGCT ATGGGCGGTA
CATGCGCTTG TTGTCGCAGA GCCCGTCATC TTCCCCACTG CGGTTCTGGG CTGCGTCACC
GTCATCTTGT CGCTGCCGCT CGCGACGCCC TGGATCGGCA TGGCCGCCGT GGTCGCGGCG
ATCGCAGCCG TCTGCGTCCT GCTGGTCGCT TTCACGATCT GGACCGCAGC CGTCGGGGTC
CGCGCTGGAG CACGTCGTCA TGGCCCGCCA TCCACCGGCT CCGGCGAGTC CTGA
|
|---|
| Protein sequence | MPPAGTTIRI RGRMSARPID EPHRASSQLE LLFDLTFVVA VAAVTAQLAH GIADGHGLAG
LIPFLQVFFA IWWAWMNFTW FASSYDTDDV AYRLLTMVQM AGVLVLAAGV PAAAGHADYG
VVTLGYLIMR IGLVAQWLRA GLEDPASRRT ALRYAAGITV VQMGWVLRLF LADAGVLPSS
SQLPLFACLV VLELAVPRWA ERARATNWHP HHIAERYGLF TIILLGESVL AASRGVEKAL
EADQISGPFV VIAGCGLVLL FALWWLYFLV PAGEGLSDRR HRSYLWGYSH YGIFAALAAL
GAGLEVAVEQ SGHDVAASPL VLGYAVAIPV GLYLALLWAV HALVVAEPVI FPTAVLGCVT
VILSLPLATP WIGMAAVVAA IAAVCVLLVA FTIWTAAVGV RAGARRHGPP STGSGES
|
|---|
| |