| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_5166 |
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| Symbol | |
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| ID | 8668460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptosporangium roseum DSM 43021 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013595 |
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| Strand | + |
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| Start bp | 5680088 |
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| End bp | 5681605 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003340687 |
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| Protein GI | 271966491 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0248944 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAAC CGGAAAGTGA GGACCCGGCC CTGACCCTAC TGGTCAGGGC CGGGGACGAC
CGTGCCGCCT CCGAGTTGTA CGAGCGGCAC TACCCGGCCG TCATCGCTTT CGCCCGCCGC
CTGTGCCAGG ACCTGCACAC CGCCGAGGAC CTGGCGAGCG AGGCGTTCGC GCGGACCCTG
CGCACCGTCC GGAACGGCCC GGCTGGTCCG ACCGGTGACT GGCGTCCCTA CCTGTACGCG
GTGGTCCGCA ACACGGCGGC GGAGTGGGCA CGCTCCGATC AGCGGTTCGT CCTGACCGAC
GAGTTCCGCG AGGACGATCT CACGACGGCC GCGCCGGAGC CGCCGGACGA TCTCGTGACC
CGCGCCTACC GCTCGCTGCC GCCACGCTGG CAGACCGTGC TCTGGCACAC CCTGATCGAG
GACGAGGAGC CCGAACGGGT CGCGAAGATC CTCGGCATCA CTCCCGGCAA CGTCGGCGTG
CTGGCCTTCC GCGCCCGCGA GGGACTGCGC AAGGCGTACC TGGCCGCGCA CGTATCCAGC
GCGTCACCCC GCTGCCAGGA GTACGCGGAG CCGCTGGCGG CGATCGTGCG CAAGAGAAGC
GGCCGCCTTC CGCGGGCGCT GCGCGCGCAC CTGGAATCCT GCGCGGGCTG TGCCCGGGCA
CACACGGAGC TGCTCGACCT CAACGCCACA CTCCGCGCAG CGCTGCCGAT CGCACTGTTC
CCGCTCGCCC TGGGAGCGGG GAAGTGGACC GCGGCGGGAG CGGGGACGCC GGGCACGGCA
GGGGCTGGGA CATCAGCCGG GGCGGGGACC GGGAAGTCGG CCGCCGCGCA GAAGGGTGCC
GCGACGCCGG GCTGGGCGAT CCCGGTGTCG GGAGCGGCGG CGATCGTCGC CGCCGCCGTG
GCCGTGTTCA GCCTGTCATG GGACCCGGCA CCCTCCCCGC CTACGCAGGC CGCCGCCCCC
GCGCCGAGCG CGTCACCCAC CCCGGAGCCC ATCCCGAAGC CCACCCGCGT GAAGACCCGG
GCGCCCGCCC GCGAGAAAGC CCCGGCCATC CGCGTGACGA CGCCGAGACC TGCGTCGCAG
TCCCCCCGCA AGCCCACTCC CCAGCCGGGC ACCCGGATCG CCCACGCGGG CCGATGTGCC
GGCGCGGCGG GCGGGCTGGT GGCGCTGCCG TGCGCCGACC CGCGTACGGC CTGGCGTACG
CGGGGCGGTG CCCAGCGGTT CCAGCTCGTC AACGTCGCCA GCGGCCGCTG CCTGGCCGCC
GGCGAGCAGT ACGACACCGT CGCCTTCAAC GGCGGCGGCA TGCTCGCGGT CCGGCTCCAG
CCCTGCTCCT CCGCCCCGGC CCAGCGCTGG CACCGCCCGG CCTTCAGCGA CGGCGTGCGC
CGGCTGGTGA GCGTCCCTTC CGGCAAGGCG CTGTCCATCG GCAAGGAGTT CGCCGGCAAG
CGTCCGCCGA CGGCGTTCAT CCTCTACGGT CCCTACACCG GCTCAGCCGA TCAGCGCATC
ACCCTCGTGG ACGGCTGA
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| Protein sequence | MIEPESEDPA LTLLVRAGDD RAASELYERH YPAVIAFARR LCQDLHTAED LASEAFARTL
RTVRNGPAGP TGDWRPYLYA VVRNTAAEWA RSDQRFVLTD EFREDDLTTA APEPPDDLVT
RAYRSLPPRW QTVLWHTLIE DEEPERVAKI LGITPGNVGV LAFRAREGLR KAYLAAHVSS
ASPRCQEYAE PLAAIVRKRS GRLPRALRAH LESCAGCARA HTELLDLNAT LRAALPIALF
PLALGAGKWT AAGAGTPGTA GAGTSAGAGT GKSAAAQKGA ATPGWAIPVS GAAAIVAAAV
AVFSLSWDPA PSPPTQAAAP APSASPTPEP IPKPTRVKTR APAREKAPAI RVTTPRPASQ
SPRKPTPQPG TRIAHAGRCA GAAGGLVALP CADPRTAWRT RGGAQRFQLV NVASGRCLAA
GEQYDTVAFN GGGMLAVRLQ PCSSAPAQRW HRPAFSDGVR RLVSVPSGKA LSIGKEFAGK
RPPTAFILYG PYTGSADQRI TLVDG
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