Gene Sros_5160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5160 
Symbol 
ID8668454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5674247 
End bp5675818 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003340681 
Protein GI271966485 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.417539 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.184804 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTCA ACCAGGACAC CGAGGCCCGG CTGCACCGGG GCAAGCGGAA GATCCTCGAC 
AGCTTCGGCG CCGATCCCAA CGTCACCGGG GCCGGCATCG GCTTCCGCCG CCGCGACGGG
CAGTGGACCG ATGAGCCTGT GGTCGTGGTC CTGGTCGCCA AGAAGCGCCC CGAGGCGCTC
GTGTCCAACC GCCGCCTGCT GCCGAGAACC GTCGAGGTGG ACGGGAGTCC CTGCGAGGTC
GACGTGATCG AGGCCGGCCC GTTCCGGATG GACCGCGTCA GTGATCCCGC ACAGGAGGTG
ACGCCGGCGG CCGTAGTGGG GGTCACCGGA CGCATGCGGC CGCCACGGCC GGGCTGCAGC
ATCTCCAACC CCCTGGACGG CGACACCGCG GGGACGCTCG GGCTGTTCGT TCTCGACAAG
ACGGACGGCA CGGTCTGTCT GATGTCCAAC AACCACGTGA TGGCCCGCAT GGGGGAGGGC
GTCAAAGGCG AGAAGATCAT CCAGCCGGGG GTCCACGACG GCGGCACGGC GGCGAAGGAC
ACGATCGCCA CGCTGAAGCG CTGGGTCCCC ATCACCACGG CCGGAACGAA GATCGACGCC
GCCATCGCCC AGCTCGTCGA CCAGATGAAC CTGTCCCTGC AGCCCGCTCT CGACCGCATG
CCACCGCTGG GGGTCAAGCA CCCGGCCGTC GGCATCTTCA CCGGCGGTGA CGACCACGGG
ACCGGCGTGA TCACCAGGAT CGACCTCGCG CTCAACGCTC TCAACGTGGT GCCCGCCGTT
TCCGCCCCGG ACGGCAGGGT GGCAGCCGCT CCTCCTGAGG CGGTGAAGGT CCCCGAGCCG
TTCATGAACA TCGAGAAGGT GGGCCGGACC TCGGGCTACA CCTCCAGCAT GATCACCGCC
ATCGGCGTCG AGTCGTTGAT CCTGACCCCC ATCGGGATGG TCCTCTACAC CGATCTCGCC
CTCACCGATC GCTTCGGCCT CGCCGGCGAC TCCGGGTCGG CGGTGTTCCA CGGCGGGGAC
GGCAACACGC TGGTCGAGCC CGAGGACAAC AGCTCGTGCC CGCTGCTGGG GAGCGTCGGA
AGCTATTACG GCCTGCCGCT GACGGGGGAC AACGACCTCG CCGACGACCT CCGGGACAAC
TTCCTCGCCC AGAGCCTGGT CGGCAGGCTC CTGGTCCGCA TCCCCTACAT CAACCAGCAG
GCGGTGATCG ACCGGCTGCA GGGGAAGCAG GCCACGGGGA ACGAGCGCTC CTACGCCTCG
CAGTACTACA CGAAGTACCA CGACTTCATG GCCACGGTCC TGGCCGACCC GAACTCGACC
GCCGTCGTCG CGCAGGAGCA CCTCGACGAC TCCATCTTCG TCATCAACGG CCTGGCCCAG
ACGGTGCTGA CCCCGCAGGA GACCCAGCTC GCCTACACCC TCTACGAGAA GGCGCTGATG
CCCACCCTGG GCATGAACCG CCGCCAGGTC CTGGAGTACA TGAACGGCCA CGACCTCTAC
CGGCTCGTCT ACGACGAGAT CGCCAAGGTG CCCACCATCG AGACGAACGG ACCCATCGAA
CTACCGCGAT GA
 
Protein sequence
MKFNQDTEAR LHRGKRKILD SFGADPNVTG AGIGFRRRDG QWTDEPVVVV LVAKKRPEAL 
VSNRRLLPRT VEVDGSPCEV DVIEAGPFRM DRVSDPAQEV TPAAVVGVTG RMRPPRPGCS
ISNPLDGDTA GTLGLFVLDK TDGTVCLMSN NHVMARMGEG VKGEKIIQPG VHDGGTAAKD
TIATLKRWVP ITTAGTKIDA AIAQLVDQMN LSLQPALDRM PPLGVKHPAV GIFTGGDDHG
TGVITRIDLA LNALNVVPAV SAPDGRVAAA PPEAVKVPEP FMNIEKVGRT SGYTSSMITA
IGVESLILTP IGMVLYTDLA LTDRFGLAGD SGSAVFHGGD GNTLVEPEDN SSCPLLGSVG
SYYGLPLTGD NDLADDLRDN FLAQSLVGRL LVRIPYINQQ AVIDRLQGKQ ATGNERSYAS
QYYTKYHDFM ATVLADPNST AVVAQEHLDD SIFVINGLAQ TVLTPQETQL AYTLYEKALM
PTLGMNRRQV LEYMNGHDLY RLVYDEIAKV PTIETNGPIE LPR