Gene Sros_5132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5132 
Symbol 
ID8668426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5645665 
End bp5646609 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content72% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003340657 
Protein GI271966461 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0599633 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTTGA CCGCGAACGA CGTCGACCGG TTCGAGGCCT CCAGGTCGCG ACTGGAGGCC 
ATCGCCTACC GCCTCCTCGG CTCCGCCGGG GAGGCCGAGG ACGCCGTGCA GGAGACGTTC
CTGCGCTGGC AGGGCGCCGA CGTCGACCGC GTCGAGGTCC CCGAGGCCTG GCTGACGAAG
GTCCTCACCA ACCTGTGTCT CAACCAGCTC ACCTCCGCGC GGGCGCGCCG CGAGACCTAT
GTGGGCCAGT GGCTTCCCGA GCCGCTGCTC GCCGGGGACC CGATGCTCGG CCCGGCCGAC
ACCGCCGAGC AGCGCGAATC GGTCTCGTAC GCGGTCCTCA CCCTCATGGA GCGCCTCTCT
CCCAACGAGC GGGCGGTGTA CGTGCTGCGG GAGGCCTTCG ACTACCCGCA CCGGGAGATC
GCCGAGATCC TCGACATCAC CGAGGCCGCC AGCCAGCAGA TCTTCCACCG CGCCAAGAAG
CACGTCGCGG ACGGCAAGGC CCGCACCGGG ATCGACGAGG CCGCCGCCCG GCGGATCGTC
GAGGAGTTCC TGGCGGCCGC CACCAGCGGC CGGATCGAGT CGCTCGTGCG CCTGCTCACC
GAGGACGCCA TCTCGATCGG CGACGGCGGC GGGAAGGTCC CGGCCCGCGC CAAGGCGTTC
GAGGGCGCCG TCGCGGTCGC GAAGTTCCTG CGGGGCCTGC TCAAACCCGG CGAGGCCAAG
CGCGCCCTGG TCGGCGGCTC GCCCGAGATC TACGCCTGGA CCGCCAACGG CGACCCCGCC
GTCGTGGCCG TCGTGGACGG CCGGGTCGTC GGTGTCATGT GCGTGGAGGT CACCGCCGGG
GGCATCGCCG CGTTCCGCAA CCAGGTCAAC CCCGACAAGC TCGAACGCGC GACCGCGCAC
TGGGCGGCCG CCGAGCACGG GGAGCCCCTG TTCAACGCCT TCTGA
 
Protein sequence
MPLTANDVDR FEASRSRLEA IAYRLLGSAG EAEDAVQETF LRWQGADVDR VEVPEAWLTK 
VLTNLCLNQL TSARARRETY VGQWLPEPLL AGDPMLGPAD TAEQRESVSY AVLTLMERLS
PNERAVYVLR EAFDYPHREI AEILDITEAA SQQIFHRAKK HVADGKARTG IDEAAARRIV
EEFLAAATSG RIESLVRLLT EDAISIGDGG GKVPARAKAF EGAVAVAKFL RGLLKPGEAK
RALVGGSPEI YAWTANGDPA VVAVVDGRVV GVMCVEVTAG GIAAFRNQVN PDKLERATAH
WAAAEHGEPL FNAF