| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_5127 |
|---|
| Symbol | |
|---|
| ID | 8668421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 5640714 |
|---|
| End bp | 5641244 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003340652 |
|---|
| Protein GI | 271966456 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.229715 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCTCG AACTGCTGAC CGGCGAGCAG ATGCTCGTAC GGCGGGCCGA ACTGGTGAGC
GTCTACCGCG AGGCGTTCAC CGGACCGCCG TGGCACGAGA ACGAGGACGC GGTCGTCGCC
TTCCGCGACC GGCTCACCGC CGACGCCGGC CGGCCGGGTT TCCGGGCGGT CTTGGCCACC
GGGAGCGGGA AGTCCTGCGG ATTCGGTACG GCGTGGCCGA CCGCCTCGCC GTTCCCCACC
GGGCGCAGTT ATGGCAACGT GCTCGCGGCC CTCGGCCCCA CCCGAACGGC CGAGCTCCTC
GTCGGTGCGT TGGAGGTGGA CGAACTGGCG GTCGCTCCGC ACGCGCGGGG GCAAGGGCTG
GCCGGGCGAC TTCTCGACCT GCTGTGCGAT CAGTGCCGCA GCTGGCTTCT GACCTCCCCG
AGCGCCCCGG ACGCCGTCCG GCTGTACGAG CGGTCCGGCT GGCTGCGGGT CGGCGAGGAC
CCGGAGGTCG TGGTGTTCGT CAGGCCTGAA CGGACGACCG GCGTGCAGTG A
|
|---|
| Protein sequence | MRLELLTGEQ MLVRRAELVS VYREAFTGPP WHENEDAVVA FRDRLTADAG RPGFRAVLAT
GSGKSCGFGT AWPTASPFPT GRSYGNVLAA LGPTRTAELL VGALEVDELA VAPHARGQGL
AGRLLDLLCD QCRSWLLTSP SAPDAVRLYE RSGWLRVGED PEVVVFVRPE RTTGVQ
|
|---|
| |