Gene Sros_5126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5126 
Symbol 
ID8668420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5639587 
End bp5640456 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003340651 
Protein GI271966455 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0428934 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.919137 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTATGG CGATACTCGC GATTCTGTGG GGTTCGGCGT TTCTCTGGAT CAAACTGGCG 
CTGAACAACG GGCTGACCCC GGTCCAGATC ACCGTCGCCC GCTCCGCGCT CGGCGCGCTC
GTGCTGCTCG CCCTGGCCCG GGTGGCACGC CAGCGTCTCC CGCGTGACCG CGGGACGTGG
GCTCGCCTGA CCGTCGCCGC CTTCTTCTGC AATGCTCTGC CCTTCTTCCT GTTCAGCGTC
GGAGAGCAGA GCGTGGACTC CGGAGTGGCG GGGGTGCTCA ACGCGACGAC CCCGCTGTGG
TCCCTGCTGC TCGGCCTGGC CGTCGGCACC GGCCGCGGGC TGCCTCCGGT ACGGCTGGCC
GGGCTCCTTC TCGGGTTCGC CGGAACGCTG CTGATCTTCG CTCCCTGGCA GGAGCGCAGC
CTGGTGAGCT GGGGCGCCCT GGCCCTGCTC GGAGCGTCCG CCAGCTACGC CGTCGCCTTC
GCCTACATGG ATCGGCGGCT CACCGGGAAG GGGACCGCAC CCCTGGCCCT GTCCGCGGCC
CAGCTCGTCG CCGCCACCGG GCTGAGCTCC CTGGCCCTGC CCGCCGGCGG CGCGGTGGCC
GAACCAACGC CGCTGGGCGT GCTCGCCCTC GCCGTCCTCG GCGTCTTCAG CACCGGATTC
ACCTTCTACC TCAGCTACCG CCTGATCGCC GACGAAGGAG CCACCAGCGC GGCCACGGTC
GGCTACCTGC TGCCGGTCGT CTCGGTGGCG CTCGGGGCGA TCGTGCTGGA CGAGGCGCTC
AGTCCCCGCG TCCTGACCGG CATGGTCGTC GTCCTCGCCG GCGTCGGCAT GACACGGCAC
GCCACGCGCA CACCCGCTCC CACCACCTGA
 
Protein sequence
MRMAILAILW GSAFLWIKLA LNNGLTPVQI TVARSALGAL VLLALARVAR QRLPRDRGTW 
ARLTVAAFFC NALPFFLFSV GEQSVDSGVA GVLNATTPLW SLLLGLAVGT GRGLPPVRLA
GLLLGFAGTL LIFAPWQERS LVSWGALALL GASASYAVAF AYMDRRLTGK GTAPLALSAA
QLVAATGLSS LALPAGGAVA EPTPLGVLAL AVLGVFSTGF TFYLSYRLIA DEGATSAATV
GYLLPVVSVA LGAIVLDEAL SPRVLTGMVV VLAGVGMTRH ATRTPAPTT