Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5125 |
Symbol | |
ID | 8668419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 5638596 |
End bp | 5639486 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | LysR family transcriptional regulator |
Protein accession | YP_003340650 |
Protein GI | 271966454 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0932924 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.723753 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGATG TGCGTCGACT GCAGATCCTC CGCGCGGTGG TCACCAGCGG CTCGGTGACC GCCGCCGCCG CCAACCTCGG CTACACGCCT TCGGCCATCA GCCAGCAGCT GGCCGTGCTG GAGAAGGAGG CCGGGATACC GCTGCTGGAG CGCGTCGGCC GGGGCGTGCG GCCCACGGAG GCGGGACGGC TGCTCACCGA GCACGCGGCC GTCATCAGCA GACAGCTGGC CGAAGCCGAG GCGGAAGTGG CCCACCTGCG CGCCGGACGC ACCGGGCAGC TGACGATCCG CTACTTCGCC ACCGCCGGCG CCGTCCTGAT GGCGCCGGCG CTCGCCTGGC TCCGCACGCA GCACCCGGGG GTGCGCATCG ACCTGAAGAT GACCGACCCC GAGGATCCGC TCTCGGAGGT GGCGCAAGGC CGGGCCGACC TGGCCATCGT GGTCGCCCCC CGCGTCCGTC ACCATGATGG CGTCCGTTTC GTCCACCTGC TTGACGACCC CTACCGCGCC GTCCTGCCCA AGGGCCACCG GCTGGCTGCG AAACGGATCC TCGACCTGGC CGACCTGGCC GAGGAGCCCT GGGTGGGCAG CGAGCGGCCC GGCCCCTGCC TCGACGCGCT CCTCGACGGC TGCGCCGCAG CGGGCTTCAG TCCCAACTTC GCGGTGGAGA GCGAGGACTA CCCCACCGCG CAGGGGTTCG TCGCCGCGGG CCTCGGGCTG AGCCTGATCC CTGACATGGG GCTGGCCAAC CGGCACCCGG CCGTCGTCAT CCGCAAGGTC CGCAACCCCG AGCCTGTCAG GGCGATCCAC GCGGCCGTGC GCGAGACCTC ACCTGCCCGG CCCGTCCTCG ACGGGCTGCT CGCCGCGCTC CACGACGCGG CCGGACGGTG A
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Protein sequence | MLDVRRLQIL RAVVTSGSVT AAAANLGYTP SAISQQLAVL EKEAGIPLLE RVGRGVRPTE AGRLLTEHAA VISRQLAEAE AEVAHLRAGR TGQLTIRYFA TAGAVLMAPA LAWLRTQHPG VRIDLKMTDP EDPLSEVAQG RADLAIVVAP RVRHHDGVRF VHLLDDPYRA VLPKGHRLAA KRILDLADLA EEPWVGSERP GPCLDALLDG CAAAGFSPNF AVESEDYPTA QGFVAAGLGL SLIPDMGLAN RHPAVVIRKV RNPEPVRAIH AAVRETSPAR PVLDGLLAAL HDAAGR
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