Gene Sros_5108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5108 
Symbol 
ID8668402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5622715 
End bp5623710 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content71% 
IMG OID 
ProductABC-type Fe3+-hydroxamate transport system periplasmic component-like protein 
Protein accessionYP_003340636 
Protein GI271966440 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.599294 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0658023 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTATTG GCCGGAAGCT CGGCTCCGCA TTGATGCTCG CACTCGTCGT GGTCACCGCC 
GGGTGCGGGT CGGACTCCGG GGCCCAGGCG CCCGCCGTGA AGGCCGCCAC CCGGGTCTTC
AAGCTGCCCG ACGGCGAGGT CACCATCCCG GCCGACCCGC GGCGGGTGGT CGCGACCGGC
TACGCCGTAC CGGTGCTGAT CGAAGCCGGC GCACCCCTGG CGGGGATCTC TTCGTGGAAG
CGGGGGCTGC CGATGATGGA CGCCAAGGCC CGCGCCGCCT ATGACAAGCT CCCGAAGGTG
GCCGGCGAAA CGGCGGCCGA GACCAACTAC GAGGCGATCG CCAACGCCAA GCCCGACCTC
ATCGTCATCG GCGTCCCCGC GCCGGTGCTG GCCGACATCG ACCTCAAGCG CCTGCGCTCC
ATCGCGCCCG TCGTGACGAT CGGCCCGACG ATCCCCTCGG CGTGGCGCGA GCTGTCCCAG
CGCCAGGCCG AAGCCGCGGG CGCGCTGGAG GGCTTCGACG CCGTCAAGGC GGCCTACGAC
GCCAAGGCCG CCGAGCTGAA GCAGAAGTAC GAGAAGGTCC TGCCGCAGCT GAAGCTCGCC
CACGTCGGCG CCTACGGGCA GGTCGACAAG GGCGCCTTCC ACCGCGAGTT CAACGGCTCG
TGGGGCACCA ACATCGCCAA CGACATCGGC GCGGACTACT ACGGCCAGGT CAAGGTGAAG
GGCGGCGGCA GCAAGGACGT GAGCGAGTAC CCCTCGATCG AGGAGCTCCC CACCGCGCTG
GGCGAGGCCG ACGCCATCAC CTACTCCGTC GCCGCCGACG GCAAGCCCCT GCCCGCCGTC
CAGTACGTCC TGGACTCCGA GCTGTGGAAG CAGCTCCCGG CGGTGAAGGC GGGCAAGGCC
TACGCCATCC GCTACACCGA GGCGGCGACC TACGGGCAGG CGCTGCTCGC CCTCGACGCG
CTCGACACGT CGTTGGCACC GCTGGCCGCG AAGTGA
 
Protein sequence
MSIGRKLGSA LMLALVVVTA GCGSDSGAQA PAVKAATRVF KLPDGEVTIP ADPRRVVATG 
YAVPVLIEAG APLAGISSWK RGLPMMDAKA RAAYDKLPKV AGETAAETNY EAIANAKPDL
IVIGVPAPVL ADIDLKRLRS IAPVVTIGPT IPSAWRELSQ RQAEAAGALE GFDAVKAAYD
AKAAELKQKY EKVLPQLKLA HVGAYGQVDK GAFHREFNGS WGTNIANDIG ADYYGQVKVK
GGGSKDVSEY PSIEELPTAL GEADAITYSV AADGKPLPAV QYVLDSELWK QLPAVKAGKA
YAIRYTEAAT YGQALLALDA LDTSLAPLAA K