Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5106 |
Symbol | |
ID | 8668400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 5620789 |
End bp | 5621478 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | putative transcriptional regulator, TetR family |
Protein accession | YP_003340634 |
Protein GI | 271966438 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0586714 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGCCC AGCCCTCTCA CAAGCCCCTC CCCCCTGCCG ACGGCCGGCC TGAAGACACG GACACGACGG ACCTGCGCGC CGACGCCCGG CGCAACCGCG CGCGCATCCT CCGAGCCGCC CGCGAGGCAT TCGCCAGCCA GGGAATCGAC GTGCCCCTGA CTACAGTGGC CCGCCGCGCA GGCGTCGGCG CCGCCACCCT CTACCGGCAC TTCCCCACCC GCGCCACTCT CGTGACCGCC GCCTTCGCCG AACAACTGGC CGTCTGCGTG ACGGCCCTCG ATGACGCTCT GTGCGACCCC GACCCCCTGC GCGGCCTGCA CACCCTCCTG GAGAAGGTGT GCACCATGCA GGCCACCGAC CGCGGCTTCG CAGCGGCGTT CATGAACCAC TTCCCCGACG CCCTCGACTA CGACCAGGAA AGCGCCCGCG CCGAAGACGG TCTGGCACAA CTGATCCGAC ACGCCAAAAA GACCGGCCAG CTGCGCGACG ATGTCCATCC CACCGACATC ACCCTCCTGC TGTTGGCCAA CGGTGGCCTG GCCGGACAAC CGCGAGACAT CGCCCTGGCC GCCTCCCGCC GCCTGCTCGC CCACTTCCTC CGGTCTTCCC AGACCCGGCA CTCAGGCCCC TTGCCGCCTC CCGCCCCCTT GAGACTGGAC CGCATCCACC AGGCTGCGAA CCGCCGCTGA
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Protein sequence | MPAQPSHKPL PPADGRPEDT DTTDLRADAR RNRARILRAA REAFASQGID VPLTTVARRA GVGAATLYRH FPTRATLVTA AFAEQLAVCV TALDDALCDP DPLRGLHTLL EKVCTMQATD RGFAAAFMNH FPDALDYDQE SARAEDGLAQ LIRHAKKTGQ LRDDVHPTDI TLLLLANGGL AGQPRDIALA ASRRLLAHFL RSSQTRHSGP LPPPAPLRLD RIHQAANRR
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