| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_5106 |
|---|
| Symbol | |
|---|
| ID | 8668400 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 5620789 |
|---|
| End bp | 5621478 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | putative transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003340634 |
|---|
| Protein GI | 271966438 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0586714 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCCC AGCCCTCTCA CAAGCCCCTC CCCCCTGCCG ACGGCCGGCC TGAAGACACG
GACACGACGG ACCTGCGCGC CGACGCCCGG CGCAACCGCG CGCGCATCCT CCGAGCCGCC
CGCGAGGCAT TCGCCAGCCA GGGAATCGAC GTGCCCCTGA CTACAGTGGC CCGCCGCGCA
GGCGTCGGCG CCGCCACCCT CTACCGGCAC TTCCCCACCC GCGCCACTCT CGTGACCGCC
GCCTTCGCCG AACAACTGGC CGTCTGCGTG ACGGCCCTCG ATGACGCTCT GTGCGACCCC
GACCCCCTGC GCGGCCTGCA CACCCTCCTG GAGAAGGTGT GCACCATGCA GGCCACCGAC
CGCGGCTTCG CAGCGGCGTT CATGAACCAC TTCCCCGACG CCCTCGACTA CGACCAGGAA
AGCGCCCGCG CCGAAGACGG TCTGGCACAA CTGATCCGAC ACGCCAAAAA GACCGGCCAG
CTGCGCGACG ATGTCCATCC CACCGACATC ACCCTCCTGC TGTTGGCCAA CGGTGGCCTG
GCCGGACAAC CGCGAGACAT CGCCCTGGCC GCCTCCCGCC GCCTGCTCGC CCACTTCCTC
CGGTCTTCCC AGACCCGGCA CTCAGGCCCC TTGCCGCCTC CCGCCCCCTT GAGACTGGAC
CGCATCCACC AGGCTGCGAA CCGCCGCTGA
|
|---|
| Protein sequence | MPAQPSHKPL PPADGRPEDT DTTDLRADAR RNRARILRAA REAFASQGID VPLTTVARRA
GVGAATLYRH FPTRATLVTA AFAEQLAVCV TALDDALCDP DPLRGLHTLL EKVCTMQATD
RGFAAAFMNH FPDALDYDQE SARAEDGLAQ LIRHAKKTGQ LRDDVHPTDI TLLLLANGGL
AGQPRDIALA ASRRLLAHFL RSSQTRHSGP LPPPAPLRLD RIHQAANRR
|
|---|
| |