Gene Sros_5103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5103 
Symbol 
ID8668397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5617207 
End bp5618130 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content74% 
IMG OID 
Producthelix-turn-helix domain-containing protein 
Protein accessionYP_003340631 
Protein GI271966435 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.171619 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGTGC TGAGCGACGT GGTGGCCTTC ATGCGGTGCG GGCGCCCCAC CTCCGCCCGC 
GTCTCCTGGC GGGCGCCCTG GGGCGTGTCG TTCCGCGCGG CGCCCGGGTC CGCCGGTTTC
CAGGTGATGC TGCGCGGGTC CTGCTGGCTC ATTCCCCCGG ATGGCGAGCC CGTTCCGCTG
AGCATGGGCG ACCTGGTGTT CCTGCCGCAC GGCACCACGT TCGCGCTGGC CGACGATCCC
GCGAGGCCGC TGGTCGAGTC GGACTGCGAC CCGCATTCCG AGCTGTTCGC CTCGGCCGAT
CTCGGTGGCA CCGGGGCCGA GACGGTGATC CTGTCCTGCG GCTACCGGCT CAACCCCGAC
AGGACTCACC CGATCCTGGG CTCGCTGCCC GGCGTGATCC ACCTGCCCGC GACGCTCGGC
AGCCATCCGG AGCTGCGGGC CGCCGTCGGG CTGCTGGCCG CTGAGATCGA CACCCCGCGC
CCCGGCACGG ACACCGTCGT GTCGTCCCTG CTCGACATGT TGCAGCTGTA CGTCCTGCGG
GCCTACTTCG AGACCCAGGA CGAGCCCTGC ACGCTGTCCG GCTGGGCCGC CGCGCTGGCC
GACCCCGCCA TCGGCCGCGC GCTCGACGCC ATCCACCGCG ACCCGGCCCG CCGCTGGACG
GTCGAGTCGC TCGGCGCCCA CGCGGGCATG TCGCGCGCCG GTTTCGCCCG CCGCTTCACG
GGGCTGGTCG GGCAACCGCC GCTGGCGTAC CTGACCTGGT GGCGGCTGGC GAGCGGGGCG
CGCATGCTGC GCGAGTCCGA CGCGTCGGTG GCGGAGGTGG CCGAGCGAGT GGGGTACGGA
TCGGAGTTCG CCTTCGGCAA CGCCTTCAAG CGGGAGTTCG GCGTGGCGCC CGGCCGGTAC
CGCCGCCGGG TCGCAGTGGC CTAG
 
Protein sequence
MDVLSDVVAF MRCGRPTSAR VSWRAPWGVS FRAAPGSAGF QVMLRGSCWL IPPDGEPVPL 
SMGDLVFLPH GTTFALADDP ARPLVESDCD PHSELFASAD LGGTGAETVI LSCGYRLNPD
RTHPILGSLP GVIHLPATLG SHPELRAAVG LLAAEIDTPR PGTDTVVSSL LDMLQLYVLR
AYFETQDEPC TLSGWAAALA DPAIGRALDA IHRDPARRWT VESLGAHAGM SRAGFARRFT
GLVGQPPLAY LTWWRLASGA RMLRESDASV AEVAERVGYG SEFAFGNAFK REFGVAPGRY
RRRVAVA