Gene Sros_5092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5092 
Symbol 
ID8668386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5609604 
End bp5610224 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content67% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003340621 
Protein GI271966425 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.318569 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.657816 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGATG ACCTGCGCGA CCTGCCGCTC CGAGAACGCA AGAAGCTGCG CACTCGCCGG 
GCCCTGGCCG AGACCGCACT CCGCCTGTTC ACCGAATGTG GATACGACGC CACCACGCTG
GACGACCTGT GCGATGCCGT AGAGGTGTCC AAGCGCACCT TCTTCCGCAA CTACCGGTCC
AAGGAGGACG TCGCGCTCGC CGCTGACAGC GACCTGTGGT CGGCCTACCT GGACTATGTG
GCCGCCCAGG AGATGAACGG CCCGCTGATC GAGGCTCTCC GCATGGCACT GGACGCCACC
CTGGGCGCCA TGGACCTCGA CTGGGATCGC CGCTTCCTGG CCGCCCGCGA GCTGTCGGAG
GCCGTCCCCG CCCTGCAGGC ACACAGTCTG GGCTACTGTC AGGACACCAC CCGGGCCCTG
GTCGAGGCGG TAAGCGGCCG TTCCGGTACC GACATCGACG AGGTGCGTCT CCGCCTGACC
GTGGAAATCT TCGTGGCCGC CTGGCGGACA GCTTCCCTGC GCTGGACTGC GCAAGGCGGC
CATGGCGGCC GCGAGGCCTT GACGAAACTG GTTGAAGAAA CCTTCGCCGA GATCCCCGCC
GCGCTCACGT CCTCTGCCTA G
 
Protein sequence
MSDDLRDLPL RERKKLRTRR ALAETALRLF TECGYDATTL DDLCDAVEVS KRTFFRNYRS 
KEDVALAADS DLWSAYLDYV AAQEMNGPLI EALRMALDAT LGAMDLDWDR RFLAARELSE
AVPALQAHSL GYCQDTTRAL VEAVSGRSGT DIDEVRLRLT VEIFVAAWRT ASLRWTAQGG
HGGREALTKL VEETFAEIPA ALTSSA