Gene Sros_5089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5089 
Symbol 
ID8668383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5607420 
End bp5608052 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content68% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003340619 
Protein GI271966423 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.627316 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACCCC GACGCCCCGA ACGCCGCAGC GAGGAATCAG CCAGAGCCAT CGTCCGAGCC 
GCCCTGGAAC TGTGCCGGGA GGTCGGCTAC GGCAAACTCA GCATCGAAGG CATCGCCGCC
CGCGCCGGAG TCGGCAAGAA CACCATCTAC CGGTGGTGGC CCTCCAAGTC CGCCGTCCTG
CTGGACGGAC TGTTGTCCGT CATGACCGTG GACGCCTCCT TCCCCGACAG CGGAGACGTG
ACCGCCGACT TCAGAACGCA GATCACGGCC GCCACCGGCA CCATCTTCCG CCCCGACACC
GGCCCTCACT ACGCCGCCCT GATCGGTGAG GCCCAGCAGG ACCCCGAACT CGCGCGGGCC
CTGTGGGACC GCCTCATCAG CCACCTGACG AGCGCCGCCA CCCAACGCAT CCAGAGCGCG
CAACGCCGAG GCCAAATCCG CCCCGACCTC GCCCCTGACC TCGTCATCGA ACTGCTTTAC
GGCCCTGTCT ACTACCACTG GCTCATACGC CAGCAGCCCG CCGACGCGGA TCACATCCAC
ATGATCGTCG ACACTGTCCT CGCCGGCCTC GCCCCGGCGA ACACCCGCCC AGACGCTCCT
CCCACCGGCA ACAGCCGCCC GCACCCACAG TAG
 
Protein sequence
MSPRRPERRS EESARAIVRA ALELCREVGY GKLSIEGIAA RAGVGKNTIY RWWPSKSAVL 
LDGLLSVMTV DASFPDSGDV TADFRTQITA ATGTIFRPDT GPHYAALIGE AQQDPELARA
LWDRLISHLT SAATQRIQSA QRRGQIRPDL APDLVIELLY GPVYYHWLIR QQPADADHIH
MIVDTVLAGL APANTRPDAP PTGNSRPHPQ