Gene Sros_5082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5082 
Symbol 
ID8668376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5602655 
End bp5603599 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content71% 
IMG OID 
Productdaunorubicin resistance ABC transporter ATPase subunit 
Protein accessionYP_003340614 
Protein GI271966418 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.682082 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCATT CTGAAGCAAT GAACTCCTAT TCAGTCGTCG CCGAAGGGCT CGTCAAGCGC 
TTCGGCGGCG CCCACGCACT CCACGGGTTC GACCTCGCCG TGCGGGAAGG GACGGTCTGC
GGGCTGCTCG GCCCCAACGG CGCGGGCAAG ACCACCGCCG TGCGCATCCT GGCCACGCTG
CTGCGAGCCG ACGGCGGCAG GGCGACCGTC GCCGGCCTCG ACGTGGCCGC CCAGGCGGCG
AAGGTCCGCC AGGTCATCGG CCTGGCCTCG CAGGAGCCCG CCGTCGACGA GATCCTCACC
GGCAGGGAAA ACCTGGTGAT GTGGGGCAGG CTCTACCACC TGGACGCCAA ACGGGCCGCG
CGCAGGGCCG ACGAATTGCT GGAACAGTTC GGGCTCACCG AGGCCGCGGG CAAGCGGATC
AAGCACTACT CCGGCGGGAT GCGCCGCCGC CTCGACCTGG CCGCCACCTT CATCCAGGCA
CCCCGCGTGC TCTTCCTCGA CGAGCCGACG ACGGGTCTCG ACCCCCGCAA CCGCAACGAG
GTGTGGCAGG CCGTCCGCAC CCTGGTCACG AACGGCAGCA CGGTGCTGCT GACCACCCAG
TACCTGGACG AGGCCGACCA GCTCGCCGAC CAGATCGCGG TGCTGCGTGA GGGCAGGGTG
ATCGCCGACG ACACTCCCGA GCGGCTGAAG TCCTCGATCG GCGGCGACCG GCTCGATCTG
GTGCTGCGCG ACCAGCGGGA CCTTCGGGAG GCGGGCGACG TCCTCGCCGC GTTCGGCCCG
CCGGTGGCCG ACCCCGACGC CCGCAGGCTG ACCGCGCCGG TTACCGACCG TATGCACGCC
CTCGGGCAGG TCATGCGCGA ACTGGAGGCC AAGGGGATCG AGGTCGAGGA CGTGGCCCTG
CGCCGTCCGA CGCTCGACGA GGTGTTCCTG AAGGTGACGG CATGA
 
Protein sequence
MSHSEAMNSY SVVAEGLVKR FGGAHALHGF DLAVREGTVC GLLGPNGAGK TTAVRILATL 
LRADGGRATV AGLDVAAQAA KVRQVIGLAS QEPAVDEILT GRENLVMWGR LYHLDAKRAA
RRADELLEQF GLTEAAGKRI KHYSGGMRRR LDLAATFIQA PRVLFLDEPT TGLDPRNRNE
VWQAVRTLVT NGSTVLLTTQ YLDEADQLAD QIAVLREGRV IADDTPERLK SSIGGDRLDL
VLRDQRDLRE AGDVLAAFGP PVADPDARRL TAPVTDRMHA LGQVMRELEA KGIEVEDVAL
RRPTLDEVFL KVTA