Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5081 |
Symbol | |
ID | 8668375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 5601876 |
End bp | 5602658 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003340613 |
Protein GI | 271966417 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.630665 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.675914 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCACG TGCTCTCCGA CGGCTGGGTG ATCGCCAGGG CGCACCTGCT GCACTGGGTG CGCAACCCCG CCGCCATCCT GTCGGGACTG CTGTACCCGA TCGTGATGGT GCTGCTGTTC GGCTACGTCT TCGGCAGCGC GATGGCCGTC GCGGGCGCGG GCGAGAACTA CCGGGAGTAC CTGATGCCCG GCATGTTCGG CCAGACGATG GCCGTCGGCA TCACGACCAC GCTGATCGTC GTCACCACGG CGGCCTCCAG GGGCGTCACC GACAGGTACC GCTCGATGCC GGTCTCGCAG ACGGGGGTGG TGCTCGGCAG GGCCATCTCC GACATGGTCA GCTCGACGCT GGAGCTGACG ATCCTCGTCG CCTGTGGCAT GGCAGTGGGC TGGAGCTGGA ACAACGGCCC CCTGAACGCG CTGGCCGCGA TGGGCCTGCT GCTGCTCCTG CGCTTCTCGC TCATCTGGGT GGGCATCTTC GCCGGGCTGA AGCTCACCCC CGAGGCGGCG AGCGCCTCGT GGATGATCAT GCTTCCGCTC ACCATGGTCG CCAACACGTT CGTCTCTCCC GCGCAGATGC CGGGCTGGAT GGGCGCGCTC GCCGAGTGGA ACCCGCTGTC GGCCACGGTC GCCGCCTGCC GCCAGTTGTT CGGCAATCCG GGCTTCGCGG GCGAGTCGTG GGCGGCGCAG CACGCCGTGC TGCTGGCCGT CGCCTGGCCC GCGGCGATCA CGCTGGTGTT CCTGCCGCTG TCGGCCCGCG CCTACCGGCG GCTGAGCCGC TGA
|
Protein sequence | MTHVLSDGWV IARAHLLHWV RNPAAILSGL LYPIVMVLLF GYVFGSAMAV AGAGENYREY LMPGMFGQTM AVGITTTLIV VTTAASRGVT DRYRSMPVSQ TGVVLGRAIS DMVSSTLELT ILVACGMAVG WSWNNGPLNA LAAMGLLLLL RFSLIWVGIF AGLKLTPEAA SASWMIMLPL TMVANTFVSP AQMPGWMGAL AEWNPLSATV AACRQLFGNP GFAGESWAAQ HAVLLAVAWP AAITLVFLPL SARAYRRLSR
|
| |