Gene Sros_5078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5078 
Symbol 
ID8668372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5597560 
End bp5598729 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003340610 
Protein GI271966414 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.131499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCAGCT ATTTCGCGGC CGGGCTGCTG GTGCTGATCA GCGCGGGCAA GCTGGCCACC 
GCGCGGCGCA TCCCGTTGAG CCCCGGTATG CGATACCTGC TGGGGTTCTT CCTGAGCATG
GCGGCAGCGC TGGCGGTCTC GGCCGAACCT ACCGTGCGAT TGCTGCTTGC CCATGACCTG
CCCACGGTGG CTCTGGTGTG CCGGCTGGTG AGCAACGCGT TGCAGATACT GGCTGTGCAC
TTCCTGATGC GGCTGGCCCG CGCCACCCGG ACCCCCGTAC CGCGCACCCG GTTGTGGCCG
CTGGTGCTGT GCTGGGTGCT GATGACGGTG TGCTTCGTCG ACGTGGTGCT GCATGTCGAT
CAGTTCGACG CTCCCGGTTT CGGCTGGCGG TTCAGTGCCG TCGGGTACCA GATGGTGCTG
GTCGGATACG CGGTCGGCTG CCTCATGACG TTCATGCGAG TGCTCACCCG GCATGCCCGG
CAGTGCCCGC GCGGCAGCTT CCGCACCGGA CTGCAGGTGA TCGTGACAGC CTCGGCGGTG
ACCGTGGTGT GGGGCCTGTA CTCCGGCCTT CCCACGCTCT GGCTGTCGGT GACCGGCCTG
TCCGGTGACG ACTTCCTGCC GGTCGGCCGG ATAATCGGGC TGACAGCGAT GGCGCTGTGG
GTCGCGGGCG CGGTGGTGAC CACCTGGCAG GGCATGGTGG AGCGACCGCT GCGGTGGCTG
ACGGCCCGGC GTGACGTCCG CGCGGTAACG CCGCTGTGGT CGGTGTTGGT GGCCGCGCTA
CCCAGGATCG CGTTGCCGCC GACTGCCCGC TGTGGCGCGG AGTTCGCGCT GTATCGCAAG
CTGATCGAGA TCCGGGACGG ACTGCTGGCC CTGCGCCAGC ATGTGCCGCC CGAACTGGCG
GACTGGGTGC GCGAGTCGGC CTGCCGGCAC GCCGCCGCCG ACGACGAGCC GACCGTGGCG
GCCGCCGGGC TGGCCGCCGC GCTGGTGGCC CAGAAGTCCG GGCGCAGTTG GCCGCAACCG
CCCGCCGCGC GCACCTCCTC GGTACCCAGC ATCGATGCGG AGACGGCCTG GCTGCGCGCG
GTGTCGGTGG CATTCACCAG CTCACCGGTG GTGGACGAGG TCCGGAAACG GGCCCGCGCG
ACCTACCCGG CGCCCGCCGA AGCGGCCTGA
 
Protein sequence
MISYFAAGLL VLISAGKLAT ARRIPLSPGM RYLLGFFLSM AAALAVSAEP TVRLLLAHDL 
PTVALVCRLV SNALQILAVH FLMRLARATR TPVPRTRLWP LVLCWVLMTV CFVDVVLHVD
QFDAPGFGWR FSAVGYQMVL VGYAVGCLMT FMRVLTRHAR QCPRGSFRTG LQVIVTASAV
TVVWGLYSGL PTLWLSVTGL SGDDFLPVGR IIGLTAMALW VAGAVVTTWQ GMVERPLRWL
TARRDVRAVT PLWSVLVAAL PRIALPPTAR CGAEFALYRK LIEIRDGLLA LRQHVPPELA
DWVRESACRH AAADDEPTVA AAGLAAALVA QKSGRSWPQP PAARTSSVPS IDAETAWLRA
VSVAFTSSPV VDEVRKRARA TYPAPAEAA