Gene Sros_5056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5056 
Symbol 
ID8668350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5580638 
End bp5581321 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content74% 
IMG OID 
Productputative transcriptional regulator, MerR family 
Protein accessionYP_003340589 
Protein GI271966393 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.589555 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCCAG TGGACCTGGC GCGCGAGCAC GGCCTGTCCA CCCAGGCGAT CAGGAACTAC 
GAGGACGCCG GCATCCTGCC CGCCGCCGAA CGCACCGTCC ACGGCTATCG CACCTATACG
CCGCTGCACG CGCAAGCCCT GCGCGCGTTC CTCGCCCTCG TGCCCGGGCA CGGTCACCAG
GCGGCCACGT CGATCATGCA GGCGGTCAAC CGGGCCGCCA CCGAAGACGC GCTGCGGCTC
ATCGACGAGA GCCACAGCCG GCTCCTCGAC GACCGCCGCA CCCTTCAGGC CGTCGAAGCC
GCGCTCCGCG ATCTGGCGCC CGTGCCGCAG GAGCGCGGCG ACACGTTCAT CGGCCCCCTG
GCCATGAGGC TCGGCATCCG CACTGCCACC CTGCGCAAAT GGGAGAACGC CGGGCTGGTC
CGGCCGCGCC GCGATCCGCA GACGGGCTAC CGGGTCTACA GCGCGGCCGA CGTACGGGAC
GTCCGGCTGG CCCACCAGCT CAGGCGGGGC GGCTACCTGC TGGAGCAGAT CGCCCCGCTG
ATCGCCCAGG TCCGCTCCGC CGGAGGCGTC GCCCCGCTGG AGTCGACCCT GCGCGACTGG
CAGGCCCGCC TGTCCGCCCG GGGCCGCGCC ATGCTCCAGG GCGCCGCCGA CCTGGACGCC
TACCTCCGCG CCCGCGAACC CTGA
 
Protein sequence
MRPVDLAREH GLSTQAIRNY EDAGILPAAE RTVHGYRTYT PLHAQALRAF LALVPGHGHQ 
AATSIMQAVN RAATEDALRL IDESHSRLLD DRRTLQAVEA ALRDLAPVPQ ERGDTFIGPL
AMRLGIRTAT LRKWENAGLV RPRRDPQTGY RVYSAADVRD VRLAHQLRRG GYLLEQIAPL
IAQVRSAGGV APLESTLRDW QARLSARGRA MLQGAADLDA YLRAREP