Gene Sros_5047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5047 
Symbol 
ID8668341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5570426 
End bp5571352 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003340580 
Protein GI271966384 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0287132 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0172925 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCAC CATACGACCC CATCGTCCTC ACCGCCGCCG TCACCGGAGG CGACGTCCTG 
CCCAGCCAGA GCCCCGCCGT CCCGTGCGGG CCAGAAGCGA TCACCGAGGC GGCCGTGGCG
GCCGCGCGGG CCGGCGCCAC CGTCGTGCAC CTGCACGCAC GGGAGCTCGA CGGCCGCCCG
ACGGGCTCGG CCTCGATGTT CAAGGAGATC GTCACCGGCG TGCGCGAGCA GTGCGACGTC
GTCATCAACA TCACCACCGG CGGGTCCGTC GACATGACAC CCGACCAGCG CCTGGAGGGC
GTCGTGGCCG TGGCACCGGA CATCGCGACG CTCAACCTCG GCACGATGAA CTTCGAGGGC
TTCCCGACCC GTTCCCGGTG GCCGCAGGTG CGCCACGACT GGGAGCGGCA GGTGCTGGAG
CAGTCCGGGT CGGTGGTCTT CACCAACACG CTCGCCACGA TGCGCCGGTT CGCCACGACG
TTCCGCGAGC TCGGGGTGAC CCCGGAGCTG GAGATATACG ACCTGAGCCA CCTGTCGATG
GCCCGGTTCC TGCTCGACGA GGGCACGCTC ACCGGACCGA TCCGCATCCA GTTCGTCCTC
GGCGTGCTCG GCGGCGCCGG CAACAGCCCG CACGACCTGT TCGCGCTGCG CGAGGCGGCC
GGCCGCATTC TCGGGCCCGA CCTGGCCGCC GTCAGTGTCG CCGGCGTCGG CTACCCGGCG
GAGCTGCGGC TCGCCGCGGT CGCCGCCGCG TCCGGGATGG ACGTCCGGGT GGGGATCGAG
GACAACCTGC GCATCCGGCG CCGCCGCCAG GCCGCCGACT CGGCCGAGCT CGTCGCGGCC
GCAGTGGCGA TCGCCGACCA GCTGGAGCGC CCGATTGCCA CCCCGGAACA GCTGCGCGCC
GAGCTCGCCG CGGTGCGCCC GTCATGA
 
Protein sequence
MRAPYDPIVL TAAVTGGDVL PSQSPAVPCG PEAITEAAVA AARAGATVVH LHARELDGRP 
TGSASMFKEI VTGVREQCDV VINITTGGSV DMTPDQRLEG VVAVAPDIAT LNLGTMNFEG
FPTRSRWPQV RHDWERQVLE QSGSVVFTNT LATMRRFATT FRELGVTPEL EIYDLSHLSM
ARFLLDEGTL TGPIRIQFVL GVLGGAGNSP HDLFALREAA GRILGPDLAA VSVAGVGYPA
ELRLAAVAAA SGMDVRVGIE DNLRIRRRRQ AADSAELVAA AVAIADQLER PIATPEQLRA
ELAAVRPS