Gene Sros_5042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5042 
Symbol 
ID8668336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5564846 
End bp5565310 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content74% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003340576 
Protein GI271966380 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.119922 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0790875 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGTG CCCTGAGCGA CTCGCCCGCC GTTACGCCGC TGCACCGGTC CGTCCGGGAC 
GAGTGGATCG ACGCCAACGG GCACCTCAGC GAGGCGTACT ACGTGCTGGT GTTCGGAGAG
GCCACCGAGC ACGCGATGGC GCACGTGGGG ATGGCGCCGG CCTACCGCAC CGAGACAGGG
TGCTCGCTGT TCACCGTGGA GGCCCACCTG CGCTACCTCG ACCAGGTGCT GCCGGGCGAG
CGGCTCGAGG TGCGCACGAT GGTGATCGGA GTGGACGCGA AGCGGCTGCT GCTGTGGCAC
GAGATGACCG CCGGCGGCCG GCTGCGGGCC ACGGCGGAGG TGCTCGGCGT CCACGTCGAC
ATCCCGAGCG GCAGGTCCCG TCCCTTCCCT GACGGGGTGC GCGCCGCCGC CGAGGCGCGG
CTCCGGCCAG TGCCGCCGGC CGCGGGCCGG GTGGGGCGGC GATGA
 
Protein sequence
MTGALSDSPA VTPLHRSVRD EWIDANGHLS EAYYVLVFGE ATEHAMAHVG MAPAYRTETG 
CSLFTVEAHL RYLDQVLPGE RLEVRTMVIG VDAKRLLLWH EMTAGGRLRA TAEVLGVHVD
IPSGRSRPFP DGVRAAAEAR LRPVPPAAGR VGRR