Gene Sros_5038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5038 
Symbol 
ID8668332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5560398 
End bp5561132 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content68% 
IMG OID 
ProductKanamycin kinase 
Protein accessionYP_003340572 
Protein GI271966376 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0328553 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCTCC CAGAACAACT TCGCCAGCTG ATCGAGCAGG ACGCCTCCTG GTCGACTGAT 
CACGAAGGAG CCAGTGGTAC GGCCCTGCGG GTCATCTCGG GATCGAAGGT CTTCTACGTC
AAGCACGGAC CCCTCGCCAG AGCCGAGCAC TTGCGCCTGC GCTGGCTTCA CGGACGCGTC
CCCATCCCCG AGGTGGTCGC CTTCGAAGAC CCCGCTCTCG TTCTTGCCGA CGTAGGCGCT
CCGTCCCTGG AAGCCGCCGC GCCCGCCGAC GTAGGCGCCG TGCTGGGCCG GACGCTGCGC
ATGCTGCACG AGTTGCCCAT CACCGAGTGC CCCTTCGACG GCCGACTGCC GGCGGTTCTC
GAACGCGCCG GCGCCAATGT CCGCGACGGC CTCGTGGACC CGGACGACTT CGACACCGAC
CATGTCGGGC TGACCCCTGA GGCGATCTAC GAACGGCTGC TGGTCACGCG CCCGCGCGTC
GAGGACCTCG TCGTCGCGCA CGGGGACTAC ACCCCCTCCA ACGTGCTGCT GCCTGCCTCG
GGAGAGCCCG TGGTCATCGA TGTCCCGGCG CTGGGTGTGG CCGACCGGTA CCGCGACCTC
GCCATCGTCC ACAGGGATTT GTCCGAGGAC CATGGCCCGG CGGCCTGGGA GGGGTTCCTT
TCCGCCTACG GCCTCGTCGA CCACATCGAG GAAGAGCGGT TGTACTACTA CCGGCTGCTG
GATGAGCTTC TCTGA
 
Protein sequence
MQLPEQLRQL IEQDASWSTD HEGASGTALR VISGSKVFYV KHGPLARAEH LRLRWLHGRV 
PIPEVVAFED PALVLADVGA PSLEAAAPAD VGAVLGRTLR MLHELPITEC PFDGRLPAVL
ERAGANVRDG LVDPDDFDTD HVGLTPEAIY ERLLVTRPRV EDLVVAHGDY TPSNVLLPAS
GEPVVIDVPA LGVADRYRDL AIVHRDLSED HGPAAWEGFL SAYGLVDHIE EERLYYYRLL
DELL