Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5021 |
Symbol | |
ID | 8668315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 5548284 |
End bp | 5548694 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | cupin region |
Protein accession | YP_003340559 |
Protein GI | 271966363 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00533136 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0498556 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTGTTT CCCGTACACC ACAGCCCACC GCTGTCGCTC CCCCCGAATG GATTGCCGGC GCGGCATGGG TCGACGAGAT CGCCGCCCCC GAGGGATCGT CGCGCTTCCG GGTCGACAGG GTTCACTTCG CGCCCGGCGC ACGCACCGCG TGGCATCGCC ACCCTCTCGG ACAGGTGCTG CACGTCACCG AAGGGACCGG GCTCGTTCAG TGCCGCGGCG GAGAGGTGCA CACCATCCGG GCCGGCGACA GTGTGCGCAT CGCACCGGGC GAGTGGCACT GGCACGGAGC CTCTCCCACC ACCTTCATGA CCCACCTGGC CATCCAAGAG GTGGCCGAGG ACGGCACCGA AGCCGAACGC GGCACCCATG TCACCGAGGC CGAATACCTC ACCGGCTCTC TGACCCACTG A
|
Protein sequence | MRVSRTPQPT AVAPPEWIAG AAWVDEIAAP EGSSRFRVDR VHFAPGARTA WHRHPLGQVL HVTEGTGLVQ CRGGEVHTIR AGDSVRIAPG EWHWHGASPT TFMTHLAIQE VAEDGTEAER GTHVTEAEYL TGSLTH
|
| |