Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5020 |
Symbol | |
ID | 8668314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 5547677 |
End bp | 5548267 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | putative transcriptional regulator, TetR family |
Protein accession | YP_003340558 |
Protein GI | 271966362 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0294081 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0543061 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACACTC GTTTCATGAG CACTGCGGAA CGTCTCATCG CAAGCACTCG CGAGCTGCTG TGGGAACGCG GCTACACCGG CACCAGCCCG AAGGCGATCC AGCAGCGGGC CGGGGTCGGG CAGGGCAGCA TGTACCACCA CTTCGCCGGC AAGCCGGACC TGGCACTCGC CGCGATTCGC CGTACCGCCG AGGAGATGCG CGCCAAGGCC GAGGAGCAGT TGTCCGCACC GGGGACCAGC GTGGACCGCG TCACCGCGTA CCTGCGCCGG GAGCGGGACG TCCTCAAGGG CTGTCCCATC GGACGTCTCA CCCAGGACCC GGACGTCATG GCCGACCCGA CGCTGCGGGC CCCGGTAGAC GAAACCCTGG CCTGGCTACG TGAGCGCCTC GCCGAGGTCC TGGCCGAGGG ACGCGAGCGC GGCGAACTGG ACACCACGCT GGACCCGCAG GCTGCCGCCG CGACCGTCGT CGCGGTCCTG CAGGGCGGCT ATGTCCTGGC CCGTGCCGCC GACTCCGTGC AGCCGTTCGA CCAGGCGATC ACCGGGGTGC TGGGCCTGCT GACCACACAT ATCTCCCCCA CCCGCAAGTA G
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Protein sequence | MYTRFMSTAE RLIASTRELL WERGYTGTSP KAIQQRAGVG QGSMYHHFAG KPDLALAAIR RTAEEMRAKA EEQLSAPGTS VDRVTAYLRR ERDVLKGCPI GRLTQDPDVM ADPTLRAPVD ETLAWLRERL AEVLAEGRER GELDTTLDPQ AAAATVVAVL QGGYVLARAA DSVQPFDQAI TGVLGLLTTH ISPTRK
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