Gene Sros_4933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4933 
Symbol 
ID8668227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5459872 
End bp5461311 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content71% 
IMG OID 
Producttransport transmembrane protein 
Protein accessionYP_003340484 
Protein GI271966288 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTCCCG ATTCACCCCC CGCCCCGCCT TCCTGGCGGG AACTGCTGGG CCCCGAACAT 
CTTGGAGCTG CGATCGTGCT GGCGGGCGGA GTGCTCGTCG GTGCGGTCAA TATCTATCTG
GCTTCGAGTC TGCTGCCGAC CGCGGTGGCC GACATCGGCG GCGCCGGCTT CTACGCGTGG
AACATGACGA TCTACCTCGT CGCCATGGTG ATCGCGACGA TGCTGGTCAG TCGGCTCCTG
GCCCGCTGGG GGAACGTCGG CGCATACCGC CTCGGCTTCG CCGTGTTCCT GGCGGGCTCG
CTGGCCTGTG CGGCGAGCCC TGCGATGCCG GTACTGCTGG CCGGCCGCGG CGTCCAGGGA
CTCGGGGCGG GGGTGCTTTC CGGGCTGGGG TTCGCCGCCA TCCGCTCTGC CCTGCCACGC
CGGCTGTGGA CCCGCGGCAA CGCCCTGATG TCGGCGATGT ACGGCGTCGG CAACTTCGTC
GGCCCGGCGC TCGGCGGCCT GTTCGCCCAG TTCGGCTCGT GGCGCCTGGC GTTCGTGGCG
ATGGCGGTGA TCGCGGCGGC GTGCTGCGCG GTCGTGCCCC GGGTGCTGCC GCGCGGCGAA
CGCAGCGACG CGCGGGCGCC GGTCCCGGCC GTGTCGCTGC TGCTGGTCAC GGCGGCCACC
GCGGCCGTCA GCCTGGCCGG AGTGCTGCCC GGCACTATAG CGATGGCGGG CGGCATCGTG
GTGGCACTGC TGCTGGTGGC CGCCTTCGTC GCCTACGAAC GGCGCAGCGA GCTGCGGGTC
TTCCCGCGCA CGACCTACCA GGCCGGGTCA CCACTGAAGT GGATCTACCT GACGCTCGGG
CTACTGGCCT TCGGCGTCGC GGTCGAGTCG TTCGTCCCGC TGTTCGGCCA GCAGCTGGGC
GGGCTGCCCC CGCTCGCGGC CGGCCTGTTC GGGGCGGCCA TCTCGCTCGG CTGGTCGCTG
ACCCAGCTCG GCAGCTCCTC GGCCACCAGG GAGCGCACGG TAGGCCGTTT GCGCATCATC
GGCCCGCTGC TCCTGGCGGC CGGTTTCCTC CTCCAGGGGC TGCTGCAGCG CGAGGACGCG
CCGATCTGGC TGGTGCTCAT CTGGGTGCCG GTGCTGTTCA TCGCGGGTTC CGGCATCGGC
CTGGCCTACC CGCACCTGTC CGTGGCTGCC ATGTCCAGCA CCCAGGATCC AGAGGAAGGA
CGCAGGGCCG CCGCGGCGAT CGCCACCGTG ACGAGCCTGT CGATCGCGTT CGGCACGGCC
GTGGCCGGAG TCCTGGTCAA TCTCGGCGAC CCGTCGATGC TCGACTCGGC ACGGTACGTA
CTGTTCGGAT TCGCGATCAT CTGCGCGATC GGTGCCATCA CCGCACGCGC GGCGGACCGT
TCAAGCCGCC CGGAGCCCGC AGATCCGGCC GACCGCACTC CGCTCCAACA GGGCCCGTGA
 
Protein sequence
MIPDSPPAPP SWRELLGPEH LGAAIVLAGG VLVGAVNIYL ASSLLPTAVA DIGGAGFYAW 
NMTIYLVAMV IATMLVSRLL ARWGNVGAYR LGFAVFLAGS LACAASPAMP VLLAGRGVQG
LGAGVLSGLG FAAIRSALPR RLWTRGNALM SAMYGVGNFV GPALGGLFAQ FGSWRLAFVA
MAVIAAACCA VVPRVLPRGE RSDARAPVPA VSLLLVTAAT AAVSLAGVLP GTIAMAGGIV
VALLLVAAFV AYERRSELRV FPRTTYQAGS PLKWIYLTLG LLAFGVAVES FVPLFGQQLG
GLPPLAAGLF GAAISLGWSL TQLGSSSATR ERTVGRLRII GPLLLAAGFL LQGLLQREDA
PIWLVLIWVP VLFIAGSGIG LAYPHLSVAA MSSTQDPEEG RRAAAAIATV TSLSIAFGTA
VAGVLVNLGD PSMLDSARYV LFGFAIICAI GAITARAADR SSRPEPADPA DRTPLQQGP