| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_4920 |
|---|
| Symbol | |
|---|
| ID | 8668214 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 5450261 |
|---|
| End bp | 5451895 |
|---|
| Gene Length | 1635 bp |
|---|
| Protein Length | 544 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | Spore coat assembly protein-like protein |
|---|
| Protein accession | YP_003340472 |
|---|
| Protein GI | 271966276 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCAGC TCAAGCATCG TATTCCGGTC AAACTCCGGC ACAACTGGAA GCTGGTCGCG
CTGTGCGCGG CGTTCCTGGC CCTGTGCTGG GGTGTGCTCG GCAGCGGGAT GATCCGCCCC
TACGTCACCA TCTCCCAGGC CGCCACGGCC GAGACCGTCA TCACGAACCT GACCGGCACC
AAGGACCTGT TCGACACCTC TGTGGCGCAC GAGGTGAAGC TCACCTTCAC CGACGCGGCC
TATGAGGACA TGCTGAGCGA GTACTTCAAG GACGGCGAGA AGAAGTACCT CGAAGCCGAC
CTGACCATCG ACGGCGTCCG CATCCCCAGC GTGGGCGTCC GGCTCAAGGG CAACTCCACC
CTGTCCGGGC TGACCTGGAA GGGACAGTCC AAGCAGCGGA GCATGCCCGG CGGCGGACAG
CGGCGCGGAG GTATGCCCGA GGGCTTCCAA CCACCCGAAG GTTTCCAACC ACCTGAGGGA
TTCCAGCCGC CCGAGGGCGG CGAGCCATCC GAAGGCTCCC GGTCACCGGG CAATGGGCCG
CCGCCAGTCG GGCAGCAGGG CAATGGCGAG CAGCCCAGAG GTGGCGGGTT CGGCGCGTCT
TTGAAGGGTG AGGAGCCGGA GAACCTGCCG TGGCTGATCA GCTTCGACGA GTTCGTGGAG
GGCCGCCGCT ACCAGGGGCA CAGCCAGGTG GCAGTACGGC CGGCCGCGAT GGGCTCGACG
ACGATGCTGA ACGAGGCACT GGGCATCGCA CTGGTCGGCG CCTCCGGTGA GCCCACCCAG
CGTTCGGCCC ACAGCGCCTT CACTGTCAAC GGCCGCACCT CGACACCGCG TCTGCTCGTG
GAATACCTCG ACGAGGGCTA TGCCGAAGGC CTCGGCGAAG GCGTGCTGTA CAAGTCGCTG
GCCGGCAGCT CCTTCAGCTA CAAGGGCGAG GACCAGACCG GGTACACCAA CGACTTCAAG
CAGATCAACA AGGTCGGCGG CCAGGATCTA CAGCCGGTCA TCGATCTGGT CAAATGGGTG
AACCAAGCCT CCGACCCCGA ATTCGCCGCA GGCCTGGGCG AGCGTTTGGA CGTGGAGTCG
TTCGCCCGTT ATCTGGTCCT GCAGAACCTC ATGGTCAACT TCGACGACAT GGCCGGGCCC
GGACGCAACT ACTACCTGTG GTACGACCTG GACACCAAGA AGTTCAAGGT CATCACCTGG
GACCTCAACC TCGCCTTCAG CGGTAACGCC AAGAGCGGTG TGAACGACAC GGTCACGATG
GGCTTCGGCC GGGGACGCCC CCAGCAGGAC CAGCAGGACC AGCAGGACCA GCCGCCTCAA
GGTTTCACCC CGCCCCAGGA CGGCCCTCAG CAGCCTCCAG AAGGAGGCAT GATGCGCATC
GGCCATCCTC TGAAGGAGAG GTTCCTCAAG AACGCCATCT TCAAGAAGGT CTACCAGGAG
CAGTATCGTG CTCTGTATGC CAAGCTGCTC GGCAACGGCA CCGCATCCGG CCTGCTCAAC
GATCTCGCCA CGTCCTACAA GCTGAACGAG GACGCCGACA CCGCCAAGGC CGACACCGAG
GCGCAGAACC TGCGCACGTT CCTGCAGACC CGCACTCAGA CACTGCGGTC CGACAAGGCG
ATCAGCGGCG GGTAG
|
|---|
| Protein sequence | MAQLKHRIPV KLRHNWKLVA LCAAFLALCW GVLGSGMIRP YVTISQAATA ETVITNLTGT
KDLFDTSVAH EVKLTFTDAA YEDMLSEYFK DGEKKYLEAD LTIDGVRIPS VGVRLKGNST
LSGLTWKGQS KQRSMPGGGQ RRGGMPEGFQ PPEGFQPPEG FQPPEGGEPS EGSRSPGNGP
PPVGQQGNGE QPRGGGFGAS LKGEEPENLP WLISFDEFVE GRRYQGHSQV AVRPAAMGST
TMLNEALGIA LVGASGEPTQ RSAHSAFTVN GRTSTPRLLV EYLDEGYAEG LGEGVLYKSL
AGSSFSYKGE DQTGYTNDFK QINKVGGQDL QPVIDLVKWV NQASDPEFAA GLGERLDVES
FARYLVLQNL MVNFDDMAGP GRNYYLWYDL DTKKFKVITW DLNLAFSGNA KSGVNDTVTM
GFGRGRPQQD QQDQQDQPPQ GFTPPQDGPQ QPPEGGMMRI GHPLKERFLK NAIFKKVYQE
QYRALYAKLL GNGTASGLLN DLATSYKLNE DADTAKADTE AQNLRTFLQT RTQTLRSDKA
ISGG
|
|---|
| |