Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4890 |
Symbol | |
ID | 8668184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 5415867 |
End bp | 5416721 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | sugar transport system (permease) |
Protein accession | YP_003340450 |
Protein GI | 271966254 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.096709 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.1595 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGATGC GGAACAGGGC GGTCTGGCTG CCGTGGGCAC TGCCCGCGAT CGTGCTGGTC ACGGTCTTCT TCGTCGCCCC GTTCCTGCTC AACGTCCGGT TCGCGTTCTC CTCCTGGACG AGCTTCCGGG CCGAGATCAC CTGGAACGGG CTGGAGAACG TCCGCACGCT GATCGACCAG GACCTGCTGG CCAACGCGGT CACCGTGACC GTGCTGTACG CGATCCTGTG CATGGCGATC CAGAACACGG TCAGCCTCTC GCTGGCCCTG GCCCTCCAGC GGACCAGCGG GATCAACACC GTCTTCCGCT CGGCGTTCTT CCTGCCGACG CTCATCTCGC CGCTGGCCGC CGGATACATC TGGCGCGGGC TGCTCGCCCC CGACGGGGCG GTCAACTCCT TCCTCGGCGT CGAGTGGGCG TGGCTGGGCG AGCCGTCCAC CGCGCTGGTG GTGGTCGCGT TCATCGACGC GTGGAAGTGG AGCGGGCTGA TCACCCTCGT CTACATCGCG GGCCTCAACT CCATCCCGAA GTCTCTGCTG GAGTCGGCGA CCGTCGACGG GGCCGGGCTG TGGACCCGGT TCCGGCGGGT GGTGTTCCCG CTGCTCGCCC CGGCGCTGAC CTTCAACGTG GCGGTCACGC TGGTGGGCGC GCTCAGCGCG TACGACGTGA TCGCCGCCAC CACCGGCGGC GGGCCCGGCG ACCACACGCG GGCCCTGAAC GTGGTGATGC GCCAGCAGTG GGGGCAGGGC TTCTTCGGCT CCGCCAGCGC GCTGGGGTTC ACCGTGACAC TGCTGGTGAT CGCCACCGCC GTGCCCCTCG TGTGGTGGCT GCGGCGCAGG GAGGTGACGG GATGA
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Protein sequence | MVMRNRAVWL PWALPAIVLV TVFFVAPFLL NVRFAFSSWT SFRAEITWNG LENVRTLIDQ DLLANAVTVT VLYAILCMAI QNTVSLSLAL ALQRTSGINT VFRSAFFLPT LISPLAAGYI WRGLLAPDGA VNSFLGVEWA WLGEPSTALV VVAFIDAWKW SGLITLVYIA GLNSIPKSLL ESATVDGAGL WTRFRRVVFP LLAPALTFNV AVTLVGALSA YDVIAATTGG GPGDHTRALN VVMRQQWGQG FFGSASALGF TVTLLVIATA VPLVWWLRRR EVTG
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