Gene Sros_4890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4890 
Symbol 
ID8668184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5415867 
End bp5416721 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content70% 
IMG OID 
Productsugar transport system (permease) 
Protein accessionYP_003340450 
Protein GI271966254 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.096709 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.1595 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGATGC GGAACAGGGC GGTCTGGCTG CCGTGGGCAC TGCCCGCGAT CGTGCTGGTC 
ACGGTCTTCT TCGTCGCCCC GTTCCTGCTC AACGTCCGGT TCGCGTTCTC CTCCTGGACG
AGCTTCCGGG CCGAGATCAC CTGGAACGGG CTGGAGAACG TCCGCACGCT GATCGACCAG
GACCTGCTGG CCAACGCGGT CACCGTGACC GTGCTGTACG CGATCCTGTG CATGGCGATC
CAGAACACGG TCAGCCTCTC GCTGGCCCTG GCCCTCCAGC GGACCAGCGG GATCAACACC
GTCTTCCGCT CGGCGTTCTT CCTGCCGACG CTCATCTCGC CGCTGGCCGC CGGATACATC
TGGCGCGGGC TGCTCGCCCC CGACGGGGCG GTCAACTCCT TCCTCGGCGT CGAGTGGGCG
TGGCTGGGCG AGCCGTCCAC CGCGCTGGTG GTGGTCGCGT TCATCGACGC GTGGAAGTGG
AGCGGGCTGA TCACCCTCGT CTACATCGCG GGCCTCAACT CCATCCCGAA GTCTCTGCTG
GAGTCGGCGA CCGTCGACGG GGCCGGGCTG TGGACCCGGT TCCGGCGGGT GGTGTTCCCG
CTGCTCGCCC CGGCGCTGAC CTTCAACGTG GCGGTCACGC TGGTGGGCGC GCTCAGCGCG
TACGACGTGA TCGCCGCCAC CACCGGCGGC GGGCCCGGCG ACCACACGCG GGCCCTGAAC
GTGGTGATGC GCCAGCAGTG GGGGCAGGGC TTCTTCGGCT CCGCCAGCGC GCTGGGGTTC
ACCGTGACAC TGCTGGTGAT CGCCACCGCC GTGCCCCTCG TGTGGTGGCT GCGGCGCAGG
GAGGTGACGG GATGA
 
Protein sequence
MVMRNRAVWL PWALPAIVLV TVFFVAPFLL NVRFAFSSWT SFRAEITWNG LENVRTLIDQ 
DLLANAVTVT VLYAILCMAI QNTVSLSLAL ALQRTSGINT VFRSAFFLPT LISPLAAGYI
WRGLLAPDGA VNSFLGVEWA WLGEPSTALV VVAFIDAWKW SGLITLVYIA GLNSIPKSLL
ESATVDGAGL WTRFRRVVFP LLAPALTFNV AVTLVGALSA YDVIAATTGG GPGDHTRALN
VVMRQQWGQG FFGSASALGF TVTLLVIATA VPLVWWLRRR EVTG