Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4888 |
Symbol | |
ID | 8668182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 5413406 |
End bp | 5414416 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | LacI family transcription regulator |
Protein accession | YP_003340448 |
Protein GI | 271966252 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.630665 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.338127 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGAGCG GACGGGTGAC GATCGCCGAT GTGGCCAGGC GAGCCGGGGT TTCCACGGCC GCCGTGTCCA AGGTGGTGCG CGGGGCCTAC GGCGTGAGCG CGGAGATGCA GGCCAAGGTG ACGCAGGCCA TCGACGAGCT GGGCTACCGC CCGCACGCCG CGGCCCGCGC CCTGCGCGGA CGCACCTACA CCCTCGGCGT CATGCTCTCC GACACCCGCA ACCCGTTCTT CCCCGACATC ATCGAGGGCG TCACCGGCCG GCTGGGCGAC ACCGAGTACC AGGTGCTGCT CGGACCCGGC GGGATCGAGC CCAGGACGCA GGCCAGGATG ACCGACGCCA TGATCGACCG GAGCATGGAC GGGCTCATCC TGATCTCGCC GGTCATGGCG GACGCCGAAC TCGCCGCCAT CGCGACGGCC ACCCCGGTCG TCGTGGTGGG CAGGCACGGC GGCGCCGCGG CCTACGACGC TGTCGTCGAC GACGACGTGA TGGGGGCGGG GCTCGTGGTC GACCACCTGG TCGGGCTCGG GCACACCCGG ATCGCGCACA TCACCCACAT GGAGCGGGCC CGCGCCCAGG GACTGCCGCA CACGGTGCGC GCCGAAGGCT ACCGCCAGGC GATGCGCGCC CACGGACTCG CCGACGACGT GCTGGCCACC TCCTTCACCG AGGAGGGCGG CTTCGAGGGC GCGCGGGAAC TGCTCGCGCG CGACGACCGG CCCACCGCGA TCTTCGCCGG GGCCGACATC GCGGCGCTCG GCGTGCTGCG CGCCGCCGAC GAGGCGGGCC TGTCGGTGCC GGAGGACCTC TCCGTCGCCG GATACGACAA CATCGGAATC GCCTCGCTCA AGCGCATCTC GCTCACCAGC GTCGACCAGG ACGGGCACGT GATCGGGGCG ACCGCCGCGC GCCTGCTCGT CGAACGCATC GAGGGACGCT CACGATCGGT GACGTCGTCG GTGTCACCCA CGCTGATCGT CCGCGGAACC ACAGGATCGC CTCGCCTCTG A
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Protein sequence | MTSGRVTIAD VARRAGVSTA AVSKVVRGAY GVSAEMQAKV TQAIDELGYR PHAAARALRG RTYTLGVMLS DTRNPFFPDI IEGVTGRLGD TEYQVLLGPG GIEPRTQARM TDAMIDRSMD GLILISPVMA DAELAAIATA TPVVVVGRHG GAAAYDAVVD DDVMGAGLVV DHLVGLGHTR IAHITHMERA RAQGLPHTVR AEGYRQAMRA HGLADDVLAT SFTEEGGFEG ARELLARDDR PTAIFAGADI AALGVLRAAD EAGLSVPEDL SVAGYDNIGI ASLKRISLTS VDQDGHVIGA TAARLLVERI EGRSRSVTSS VSPTLIVRGT TGSPRL
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