Gene Sros_4881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4881 
Symbol 
ID8668175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5405322 
End bp5406131 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content67% 
IMG OID 
Productmonosaccharide-transporting ATPase 
Protein accessionYP_003340441 
Protein GI271966245 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.196924 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0342078 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGCGG GAACCGTCCT GCGCACCGTC TGGCTGATCG TCGCGGTCGG GTTCATGCTG 
CTGCCGGTCT ATGCCATGCT CGTCGTCGCC TCGGCGCCCG ACGACACCGA CCTGCGCGGA
CTGGTCTTCA ACGGCTTCCA CCTGCCCGAG AACATCGGGC TGCTGTTCGG CGAGGGCAAC
CTGCCCACCT ACCTGCGCAA CAGCCTCATC CTGTGCGTCG GCACCGGCGT CCTGGACGTG
ATCTTCTCGG CCGCCGCCGG TTACGCGATG GCCCAGCTGT CCTTCCCCGG CCGCCGCGTC
CTGTTCGCGC TGGTGATCGG CACGCTCGCG CTCACCCCGA TGGTCCTGGT CATCCCCGTC
TTCCTCATCG TGAAGGAGCT CGGCTGGGTC AACACCTTCC AGGGCATGAT GGTGCCGGGC
ATGATCAGCG CGTTCGGCGT CTTCCTGGTG CGGCAGTTCG CCCTCGGCAT CCCGAAGGAG
CTGCTGCTGG CCGCGCGGGT CGACGGCGCC GGGGAGTTCC GCATCTTCGC GCGCATCGCC
GTGCCGCTGC TCAAGCCCGC GCTCATCACC CTGTTCCTCG TGCATTTCCT AGCACAGTGG
GACAACCTGC TCTGGCCGCT GATCGTGGCT AACGAGCAGG AGCTGTGGCC GTTGCCGGTG
GGGCTGGCCA ACTTCCAGAG CGAGGTCGGC TTCAACTATC ACCTGACCAC CACCGCGGCA
CTGGTCACCG CCGTGCCACC GTTCATCCTG ATGGTGGCGC TGCAGCGCTA CTACGTGGCT
GGGCTCACCT TCGGAGGGCT GAAACGATGA
 
Protein sequence
MRAGTVLRTV WLIVAVGFML LPVYAMLVVA SAPDDTDLRG LVFNGFHLPE NIGLLFGEGN 
LPTYLRNSLI LCVGTGVLDV IFSAAAGYAM AQLSFPGRRV LFALVIGTLA LTPMVLVIPV
FLIVKELGWV NTFQGMMVPG MISAFGVFLV RQFALGIPKE LLLAARVDGA GEFRIFARIA
VPLLKPALIT LFLVHFLAQW DNLLWPLIVA NEQELWPLPV GLANFQSEVG FNYHLTTTAA
LVTAVPPFIL MVALQRYYVA GLTFGGLKR