Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4874 |
Symbol | |
ID | 8668168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 5398235 |
End bp | 5399116 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003340435 |
Protein GI | 271966239 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00969323 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACCACCA ACGAGCATGC TGAGCGGTTC ACCCTGTTGC GGCCGCTGCT GTTCACGATC GTCTACGAGA TACTCGGTTC GGCGACCGAA TCCGACGACG TGCTGCAGGA CGGCTATCTC CGGTGGGCGG ACGTGGACCT GGCGACGGTC CGTGACACCA AGTCGTACCT GGCGCGGCTG GTGACCCGTC AGGCACTCAA CGCGTTGCGG GCCGGCGCGC GCCGCCGCGA GGACTACGTC GGTGTGTGGC TGCCGGAGCC GCTGCTGCTC GACGAGCACG ACGCGTCGGC GGACGTGGTG CTCGCCGAGT CGGTGTCGAT GGCGATGCTG GTGCTGCTCG AAACGCTCAC CCCCGATGAG CGCGCGGTAT TCGTCTTGCG CGAGGTGTTC GGCTTCGACT ACGACGAGAT CGCGGGAGCA GTGGGCAAAT CGGTCGTGAC GGCACGCCAG GTGGCGCATC GCGCCCGCGA GCACGTAGCG GCGCGACGTA AGCGCTTCGA GCCCGCAGGC CCGGCCAAGA CCGCGCGGAT CACCGGGCAG TTCATGGCCG CGGTGACCAC CGGCGACATG GAGGGGCTGC TCTCGCTGCT CGCGCCGGAC GTCACCTGGA CCACCGACAG CGGCGGCAAG GTGATCGCGG TGCGCCGGCC TGTGATGGGC GCGGAGAAGG TGGCCGCGCT CCTCCTGGGA ATCTTCCGCG CGGACACGCG GATCGAGTCG GTGAACTGCA ACAACACGCC CGCGCTTGTC GCCTACAGCG GCGACCACCT GGAGGGTGTC TTCCTGGTCG AAGTCGTCGG CGGGAAGATC ACTCACTTCT ACGCCATCCG CAATCCGGAC AAACTCCTCG CATTGGCAGC ACCACGTCAG ATCAGCCGGT AG
|
Protein sequence | MTTNEHAERF TLLRPLLFTI VYEILGSATE SDDVLQDGYL RWADVDLATV RDTKSYLARL VTRQALNALR AGARRREDYV GVWLPEPLLL DEHDASADVV LAESVSMAML VLLETLTPDE RAVFVLREVF GFDYDEIAGA VGKSVVTARQ VAHRAREHVA ARRKRFEPAG PAKTARITGQ FMAAVTTGDM EGLLSLLAPD VTWTTDSGGK VIAVRRPVMG AEKVAALLLG IFRADTRIES VNCNNTPALV AYSGDHLEGV FLVEVVGGKI THFYAIRNPD KLLALAAPRQ ISR
|
| |