Gene Sros_4874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4874 
Symbol 
ID8668168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5398235 
End bp5399116 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content67% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003340435 
Protein GI271966239 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00969323 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCACCA ACGAGCATGC TGAGCGGTTC ACCCTGTTGC GGCCGCTGCT GTTCACGATC 
GTCTACGAGA TACTCGGTTC GGCGACCGAA TCCGACGACG TGCTGCAGGA CGGCTATCTC
CGGTGGGCGG ACGTGGACCT GGCGACGGTC CGTGACACCA AGTCGTACCT GGCGCGGCTG
GTGACCCGTC AGGCACTCAA CGCGTTGCGG GCCGGCGCGC GCCGCCGCGA GGACTACGTC
GGTGTGTGGC TGCCGGAGCC GCTGCTGCTC GACGAGCACG ACGCGTCGGC GGACGTGGTG
CTCGCCGAGT CGGTGTCGAT GGCGATGCTG GTGCTGCTCG AAACGCTCAC CCCCGATGAG
CGCGCGGTAT TCGTCTTGCG CGAGGTGTTC GGCTTCGACT ACGACGAGAT CGCGGGAGCA
GTGGGCAAAT CGGTCGTGAC GGCACGCCAG GTGGCGCATC GCGCCCGCGA GCACGTAGCG
GCGCGACGTA AGCGCTTCGA GCCCGCAGGC CCGGCCAAGA CCGCGCGGAT CACCGGGCAG
TTCATGGCCG CGGTGACCAC CGGCGACATG GAGGGGCTGC TCTCGCTGCT CGCGCCGGAC
GTCACCTGGA CCACCGACAG CGGCGGCAAG GTGATCGCGG TGCGCCGGCC TGTGATGGGC
GCGGAGAAGG TGGCCGCGCT CCTCCTGGGA ATCTTCCGCG CGGACACGCG GATCGAGTCG
GTGAACTGCA ACAACACGCC CGCGCTTGTC GCCTACAGCG GCGACCACCT GGAGGGTGTC
TTCCTGGTCG AAGTCGTCGG CGGGAAGATC ACTCACTTCT ACGCCATCCG CAATCCGGAC
AAACTCCTCG CATTGGCAGC ACCACGTCAG ATCAGCCGGT AG
 
Protein sequence
MTTNEHAERF TLLRPLLFTI VYEILGSATE SDDVLQDGYL RWADVDLATV RDTKSYLARL 
VTRQALNALR AGARRREDYV GVWLPEPLLL DEHDASADVV LAESVSMAML VLLETLTPDE
RAVFVLREVF GFDYDEIAGA VGKSVVTARQ VAHRAREHVA ARRKRFEPAG PAKTARITGQ
FMAAVTTGDM EGLLSLLAPD VTWTTDSGGK VIAVRRPVMG AEKVAALLLG IFRADTRIES
VNCNNTPALV AYSGDHLEGV FLVEVVGGKI THFYAIRNPD KLLALAAPRQ ISR