Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4873 |
Symbol | |
ID | 8668167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 5397069 |
End bp | 5398238 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | NADH dehydrogenase FAD-containing subunit-like protein |
Protein accession | YP_003340434 |
Protein GI | 271966238 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00532765 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGTTGAAC ACAGCACACT CCACAAGGTC GTGGTCATCG GCGGCGGTTA CGCGGGAACC GTCGCGGCCA ACCACCTGCG TATGCGCACC GACGTCGACA TCACCCTGGT CAACTCCCGC CCGAAGTTCG TCGAACGGAT CCGGCTGCAC CAGTTCGTGG CCGGCAATTA CGACGCCTCG GTCGACTACG GCACGCTGCT CGGCGACGGC ATCACGTTGG TGGTCGACAA CGCCACCCGG ATCGACACCG CCTCACAGAC GGTGGAGCTG GCATCGGGCC GCGCGCTGGA CTACGACCAC GTCATCTACG CGGTCGGCAG CACCGGCGCG GTCCCCTCCT CGGTGCCAGG CGCGGCCGAA TTCGCCTACT CCGTCGCCGA ATTCGAGTTC GCTCAGCGGC TGCGTGCCAG GCTGGTGGAG CTGCCGGCCC ATGCCGCGGT CACCGTGGCC GGCGGCGGGT TGACCGGCAT CGAGACGGCC GCGGAACTCG CCGAGCAAGG ACGTACGGTC ACTCTGGTCT GCGGCGGAAC CCTGGCTCCG TCACTCAGCG CTCCTGCCCG CCGATCCGTC GCGACGTGGC TGTCCGAGCA CGGCGTCACC GTGCTCGAGG CCAACGCGGT GGCCGAGGTC CGGCAGGACG CGGTCGTCTT GACCGATGGA CCCGTACGGC AGAGCGCACT CACCATCTGG ACGGCCGGTT TCGGTGTGCC GGGCTTGGCG GCGGCCAGCG GGTTGCGCGT CGACGCGCTC GGCCGGCTGC TCACCGACGA AACGCTGATC AGCGTCGATG ACGACCGCAT CGTCGCGGCG GGTGACGCCG CTTCACCGTC GGGCCGCCCG CTGCGGATGA GCTGCCAGGC CGCGGTACCG CTCGGGATGC AGGCCGCCAA CACCGTGCTG AGCCGCATCG CGGGAACAGC ACCGGCGGCG ATCGACCAGG CCTTCAAGGG ATCGTGCATC AGCCTGGGCC GGCATGCCGG TACGATGCAG CTCGCCCGCG AGGACGACAC CCCCTTGGAC TCCTACTTCG ACGGGCAGAA GGCCGCGGAG CTCAAGGAGG AGTTGTGCCG GAGGGCGGTG ACGGGTATCG CCATGGAGGC CCGTAGCCTG GGTGCCGTCG TTTGGCCCAA GGGCGGGCCG CGTGCCGCGC AGATGGTCGC CTCCCCATGA
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Protein sequence | MVEHSTLHKV VVIGGGYAGT VAANHLRMRT DVDITLVNSR PKFVERIRLH QFVAGNYDAS VDYGTLLGDG ITLVVDNATR IDTASQTVEL ASGRALDYDH VIYAVGSTGA VPSSVPGAAE FAYSVAEFEF AQRLRARLVE LPAHAAVTVA GGGLTGIETA AELAEQGRTV TLVCGGTLAP SLSAPARRSV ATWLSEHGVT VLEANAVAEV RQDAVVLTDG PVRQSALTIW TAGFGVPGLA AASGLRVDAL GRLLTDETLI SVDDDRIVAA GDAASPSGRP LRMSCQAAVP LGMQAANTVL SRIAGTAPAA IDQAFKGSCI SLGRHAGTMQ LAREDDTPLD SYFDGQKAAE LKEELCRRAV TGIAMEARSL GAVVWPKGGP RAAQMVASP
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