Gene Sros_4873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4873 
Symbol 
ID8668167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5397069 
End bp5398238 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content70% 
IMG OID 
ProductNADH dehydrogenase FAD-containing subunit-like protein 
Protein accessionYP_003340434 
Protein GI271966238 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00532765 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGTTGAAC ACAGCACACT CCACAAGGTC GTGGTCATCG GCGGCGGTTA CGCGGGAACC 
GTCGCGGCCA ACCACCTGCG TATGCGCACC GACGTCGACA TCACCCTGGT CAACTCCCGC
CCGAAGTTCG TCGAACGGAT CCGGCTGCAC CAGTTCGTGG CCGGCAATTA CGACGCCTCG
GTCGACTACG GCACGCTGCT CGGCGACGGC ATCACGTTGG TGGTCGACAA CGCCACCCGG
ATCGACACCG CCTCACAGAC GGTGGAGCTG GCATCGGGCC GCGCGCTGGA CTACGACCAC
GTCATCTACG CGGTCGGCAG CACCGGCGCG GTCCCCTCCT CGGTGCCAGG CGCGGCCGAA
TTCGCCTACT CCGTCGCCGA ATTCGAGTTC GCTCAGCGGC TGCGTGCCAG GCTGGTGGAG
CTGCCGGCCC ATGCCGCGGT CACCGTGGCC GGCGGCGGGT TGACCGGCAT CGAGACGGCC
GCGGAACTCG CCGAGCAAGG ACGTACGGTC ACTCTGGTCT GCGGCGGAAC CCTGGCTCCG
TCACTCAGCG CTCCTGCCCG CCGATCCGTC GCGACGTGGC TGTCCGAGCA CGGCGTCACC
GTGCTCGAGG CCAACGCGGT GGCCGAGGTC CGGCAGGACG CGGTCGTCTT GACCGATGGA
CCCGTACGGC AGAGCGCACT CACCATCTGG ACGGCCGGTT TCGGTGTGCC GGGCTTGGCG
GCGGCCAGCG GGTTGCGCGT CGACGCGCTC GGCCGGCTGC TCACCGACGA AACGCTGATC
AGCGTCGATG ACGACCGCAT CGTCGCGGCG GGTGACGCCG CTTCACCGTC GGGCCGCCCG
CTGCGGATGA GCTGCCAGGC CGCGGTACCG CTCGGGATGC AGGCCGCCAA CACCGTGCTG
AGCCGCATCG CGGGAACAGC ACCGGCGGCG ATCGACCAGG CCTTCAAGGG ATCGTGCATC
AGCCTGGGCC GGCATGCCGG TACGATGCAG CTCGCCCGCG AGGACGACAC CCCCTTGGAC
TCCTACTTCG ACGGGCAGAA GGCCGCGGAG CTCAAGGAGG AGTTGTGCCG GAGGGCGGTG
ACGGGTATCG CCATGGAGGC CCGTAGCCTG GGTGCCGTCG TTTGGCCCAA GGGCGGGCCG
CGTGCCGCGC AGATGGTCGC CTCCCCATGA
 
Protein sequence
MVEHSTLHKV VVIGGGYAGT VAANHLRMRT DVDITLVNSR PKFVERIRLH QFVAGNYDAS 
VDYGTLLGDG ITLVVDNATR IDTASQTVEL ASGRALDYDH VIYAVGSTGA VPSSVPGAAE
FAYSVAEFEF AQRLRARLVE LPAHAAVTVA GGGLTGIETA AELAEQGRTV TLVCGGTLAP
SLSAPARRSV ATWLSEHGVT VLEANAVAEV RQDAVVLTDG PVRQSALTIW TAGFGVPGLA
AASGLRVDAL GRLLTDETLI SVDDDRIVAA GDAASPSGRP LRMSCQAAVP LGMQAANTVL
SRIAGTAPAA IDQAFKGSCI SLGRHAGTMQ LAREDDTPLD SYFDGQKAAE LKEELCRRAV
TGIAMEARSL GAVVWPKGGP RAAQMVASP