Gene Sros_4872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4872 
Symbol 
ID8668166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5395620 
End bp5396558 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content70% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003340433 
Protein GI271966237 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00989255 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCACCC AATCCCGGCC AGGACACGGC CGGCTCGATC CCGGCCTGGA CGCGATCACG 
AGCGAGCGGC GCCAGCTGAT CAATATCGCC TACCGGCTTC TGGGCTCCCT GGCCGAGGCC
GAGGACGCCG TACAGGAGAC CTACGCCCGC TGGTACGCCA TGTCCCCGCA GCAGCAGGAC
GCCATCGAAT CCCCCGGCGC CTGGCTGACG ACAGTCACCA GCCGCATCTG CCTCACCCTG
CTCAGCTCCG CCCGGGTCCG ACGAGAGACC TACGTGGGTG AATGGATCCC CGAGCCGCTA
CCCGAACGTA CGGAGCGGAG CACCGGGCGG CCGGGCGGCA CCACCGTCGA CCCGGCCGAC
CGGGTCACCC TGGATGAGTC GGTCAACATG GCCTTCCTGG TCGTGCTCGA ATCGATGACC
CCGGCCGAGC GCGTCGCGTT CATCCTGCAC GATGTCTTCC GCTACTCCTT TGCCGAAGTG
GCCGGGATCG TCGGCCGTAC GCCGGCGGCC TGCCGCCAGC TGGCCTCCTC CGCCCGCCGC
CGCATCCGCG ACTCGCAGGG CCCCGCGAGT CCGACAGTCC AGCAGGCCGG CATCGTCAGG
GACTTCAAGC AGGCATGGGA GGCCAAGGAC ATCGACGCCC TCATCGGCCT GCTCGACCCC
GACGCCACGG CGATCGCCGA CGGCGGCGGC CTCGCCACGA CCTTCCTGCG CCCCATCGAA
GGCGGCGAGC AGATCGCGCG CGCCTGGGTC GAGATCGCCG ACCGGAGGCC CGGCGACATG
ACGTTCCTGG AGCGTACGGT CAACGGTCAG CCCGGCCTGG TGGCTCAGCA AGACGGCGTC
ACCGTGACGG TGTTCGCGTT CGAGGTCGCA GGCGACCGGA TCAAGCGCAT CTGGGCAGTA
CGCAACCCCG AGAAGCTCCG CCGCTGGACG ACGGGCTGA
 
Protein sequence
MTTQSRPGHG RLDPGLDAIT SERRQLINIA YRLLGSLAEA EDAVQETYAR WYAMSPQQQD 
AIESPGAWLT TVTSRICLTL LSSARVRRET YVGEWIPEPL PERTERSTGR PGGTTVDPAD
RVTLDESVNM AFLVVLESMT PAERVAFILH DVFRYSFAEV AGIVGRTPAA CRQLASSARR
RIRDSQGPAS PTVQQAGIVR DFKQAWEAKD IDALIGLLDP DATAIADGGG LATTFLRPIE
GGEQIARAWV EIADRRPGDM TFLERTVNGQ PGLVAQQDGV TVTVFAFEVA GDRIKRIWAV
RNPEKLRRWT TG