| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_4852 |
|---|
| Symbol | |
|---|
| ID | 8668146 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 5374804 |
|---|
| End bp | 5375589 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003340413 |
|---|
| Protein GI | 271966217 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.059944 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTGA TCGAAGCGGA GCGGCTACGG AAGGTGTACG GCACCGCCAC CGCGGTCGAT
GAGGTCTCCT TCACCGTGGC CGAAGGTGAG TCGCTGGCCA TCGTGGGAGA GTCCGGGTCG
GGGAAGACCA CCGTCGCCCG CATGCTGCTC GGCCTGGAGA TGCCCACCAG CGGGACGATC
AGCGTCTGCG GGCGGCCGCG TCCGGCAGGC CGGGTGTCGG CCGGGGAGCG GCGCAGACGG
GCACGAGAGA TCCAGATCGT CTTCCAGGAT CCCTATTCCT CGCTGGACAA GCTGCAGCGG
GTCGGCGACG TCGTCGAAAC GAGCCTTGCC CTGCACTTCT CGCTCACCCC CGCCGAGCGG
CGGAAGAAGG CGCTGGACCT GCTTGAATCC GTGGGCCTGG CCGAACGTCA CGCCACGATG
CTGCCCAGAC AGCTGTCCGG AGGGCAGCGC CAGCGTGTGG CCATCGCCCG CGCCCTGGCG
GTGGAGCCAC GCGTGCTGGT GCTGGACGAG GCGGTCGCCG CGCTCGACGT CTCGATCCAG
GCGCAGATCC TCAACCTGCT CGCCGACATC CGCGAGCAGC GGTCGATCAG CTATGTCTTC
ATCTCCCACG ACCTGGCCGT GGTCAACCAG ATCAGCGACA CGGCCGTCGT GATGCGTCAC
GGCCGCGTCG TGGAGCGAGG AACCACCCGC GCCCTGCTGC GCGAGCCGCG GGAGGAATAC
ACCAAAGCCC TGCTGGCCGC CGTACCCAGG CCCGGATGGA AGCCGACCCG GAGGAACACA
CAGTGA
|
|---|
| Protein sequence | MSVIEAERLR KVYGTATAVD EVSFTVAEGE SLAIVGESGS GKTTVARMLL GLEMPTSGTI
SVCGRPRPAG RVSAGERRRR AREIQIVFQD PYSSLDKLQR VGDVVETSLA LHFSLTPAER
RKKALDLLES VGLAERHATM LPRQLSGGQR QRVAIARALA VEPRVLVLDE AVAALDVSIQ
AQILNLLADI REQRSISYVF ISHDLAVVNQ ISDTAVVMRH GRVVERGTTR ALLREPREEY
TKALLAAVPR PGWKPTRRNT Q
|
|---|
| |