| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_4832 |
|---|
| Symbol | |
|---|
| ID | 8668126 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 5352450 |
|---|
| End bp | 5355041 |
|---|
| Gene Length | 2592 bp |
|---|
| Protein Length | 863 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | cation transporting P-type ATPase |
|---|
| Protein accession | YP_003340394 |
|---|
| Protein GI | 271966198 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGACGC TGACAGAGCC GAAGGTCCCA CCCCTGTGGG ACGGTCTCCT CTATGTCGGC
GACACCTCCG CTCGGCAGCG TGAAGGCATG TTGGCTATGT CCCCGGCACG GTCGGGACTG
ACCTCCGCGG AGGCGGCGCG ACGCCTCGCC GAAGGGGGAG CGAACATGCT GCCGGCCGGT
CGGCGGGCGC CGGCGGCCGT GCTGCTGCTC CGGGAGATGG TCCACTTCTT CGCGCTGATG
CTGTGGATGG CGGCGGGATT GGCGCTTCTG GCGGGTATGC CTCAGCTGGC GCTGGCCATC
GTCGTGGTGG TGGTGCTGAA CGGCGCGTTC GCCTTCGTCC AGGAGTATCG CGCGGACAAG
GCCGGGCAGC GCCTGCGGGA ACTGATCCCC GCCGACGTCA GGGTCGTCCG GGACGGACAC
CGCATGATGG TGAACGCCGC GGATCTGGTC GTGGGCGACG TTGTGCTGCT GGAGGCAGGC
GACCGGATCT CGGCCGACCT GGCTCTGGTC GAGGTGCACG CGCTGGCGGT CAACGAGTCG
ATGCTGACGG GAGAGAGCGT CCCGCTCCGG CCTTGTGAAG GGGCCACGGT CTTCGCTGGG
ACCTTCGTGG TCGAAGGGGA GGCGGTCGGC GTCGTGACAG CAACGGGCAC GCGCACCCGG
CTGGCCGGCG TGGCCGCGCT CACCCATGGC ACGACCCGGC CGCCGAGCCC GCTCGCCCGC
CAGCTCGGGC GGGTCGTCCA GATGGTCGCC GCGATCGCGC TCGGCGTCGG CGTGGTGTTC
TTCGCCCTGT CCCTGCTGCT CGGCATGGCC CCTTCGACAG GCTTCCTGTT CGCTCTCGGA
GTCACGGTGG CACTGGTCCC CGAAGGGCTG CTGCCCACGG TCACGTTGTC GCTGGCGCGG
TCGGCGCAGC GGATGGCCGC CCAGAAGGCA CTGGTCCGCC ACCTGGAAGC TGTGGAGACA
CTGGGCTCGA CCACGTTCAT CTGCACGGAC AAGACCGGAA CCCTTACCCG CAACGAGATG
GCCGTCGTAC AGGTGTGGGC TCCGGGCGGT GTCCTCGACC TTGCCGAACC GGCGTCGGCC
GCGGAGATCA TGCGCTCCGC CATGCTCAGC TCGACCGGAC GGCTGGTCCG CATGAATGGC
CATCGGAAAC CGGTCGGTGA CCCCATGGAG GTGGCTCTGC ACGCGCTGGC ACTGCGCGCT
GGATCGGGGG AGGATGTGGC GGTCACCAGA CGCTTCCCAT TCGATCCCGT CCGCCGCCGC
TCCTCGGTAG TCGCCGACGG CGTGCTCCAT GTCAAGGGCG CCCCAGACTC GGTTCTGCCG
CTGTGCGCAG CCGTGGCGGG AGCGGAACAG GCGCTGGAGG ACATGAGCCG GCACGGGCTT
CGCGTCCTGG CTGTCGCCCG CCGGACCGCT CCGGCGGTTT CCACCGCCGC GGAGGCGGAG
CGGGATCTGA CACTGCTCGG CCTCGTAGGC CTGGAGGATC CGCCGCGCGA GGATGTGGCC
GAGGCGATCG AAAAGTGCCG CCTGGCGGGG ATCAATTTGG CCATGATCAC CGGAGACCAT
CCCGGTACGG CCCGCGCGAT CGCGGAAAAG GTCGGCCTGC TCGGGCCGGA GGGGCTCGTG
GTCACCGGCG CCGAGCTGCC CGGGACCGAC GACGCCCTCG GCGCGTTGCT CGACCGCGAC
GGGGCCGTGG TCGCCAGGGC GACGCCGGAG GACAAGCTGC GCATCGCCCG CGCGTTACGC
GGACGCGGGC ACGTGGTGGC GATGACCGGG GACGGAGTCA ACGACGGACC CGCGCTGCGC
GAAGCCGACA TCGGGGTGGC CATGGGCGCC TCGGGCACCG ATGTCGCCCG CGAGGCGGCG
GACCTGATCC TGCTGGATGA CCATTTCGCA ACCATTGTCA CGGCGGTGGA GCTCGGACGG
GCCACCTACG CCAATATCCG CAGGTTTCTC ACCTACCACC TGACCGACAA TGTGGCCGAG
CTCACCCCGT TCGTCGTCTG GGCGCTCAGC GGCGGCACGA TTCCGCTCGC GCTCACCGTG
CTGCAGGTGC TGGCCCTCGA CATCGGCACC GATCTGCTGC CCGCCCTCGC TCTCGGCGCA
GAACCGCCCA ACCCGCAGAC CATGCACGGT CCCGCGCGGG CGGGTTCGCT GGTGGACCGC
CGCCTGCTCC GCCGGGTGTT CGGGGTCCTC GGGCCTGCGG AGGCCGTCGT AGAGATGGCC
GGTTTTGTCA CGGTGCTGAT GCTGGGCGGG TGGGTGTTCG GCGCCGAGCC GTCCCCGGAA
CTGCTCGCCG CGGCCTCGGG TACGGCTTTC GCCGCCGTGG TCCTGGGCCA GCTCGCCAAC
GCCTTCGCCT GCCGCAGCGA GACCCGCTGG GCCGGGCACC TGCGGTGGAC GGGTAATCCC
CTCCTGCTGT GGGCGGTCGC GATCGAAGTC GTGTTACTGC TGATCTTCCT CGGTCTCCCG
CCGCTGACCA GCCTGCTCGG CGGTTCGTTC CCTTCACCCG CAGGCTGGGC GCTGGCGGCG
CTGGCCGTGC CCGCGGTCGT GGCGGCCGAT ACGCTGCACA AGGCGATTCA GACCCGGAGC
GGCCCACGAT GA
|
|---|
| Protein sequence | MTTLTEPKVP PLWDGLLYVG DTSARQREGM LAMSPARSGL TSAEAARRLA EGGANMLPAG
RRAPAAVLLL REMVHFFALM LWMAAGLALL AGMPQLALAI VVVVVLNGAF AFVQEYRADK
AGQRLRELIP ADVRVVRDGH RMMVNAADLV VGDVVLLEAG DRISADLALV EVHALAVNES
MLTGESVPLR PCEGATVFAG TFVVEGEAVG VVTATGTRTR LAGVAALTHG TTRPPSPLAR
QLGRVVQMVA AIALGVGVVF FALSLLLGMA PSTGFLFALG VTVALVPEGL LPTVTLSLAR
SAQRMAAQKA LVRHLEAVET LGSTTFICTD KTGTLTRNEM AVVQVWAPGG VLDLAEPASA
AEIMRSAMLS STGRLVRMNG HRKPVGDPME VALHALALRA GSGEDVAVTR RFPFDPVRRR
SSVVADGVLH VKGAPDSVLP LCAAVAGAEQ ALEDMSRHGL RVLAVARRTA PAVSTAAEAE
RDLTLLGLVG LEDPPREDVA EAIEKCRLAG INLAMITGDH PGTARAIAEK VGLLGPEGLV
VTGAELPGTD DALGALLDRD GAVVARATPE DKLRIARALR GRGHVVAMTG DGVNDGPALR
EADIGVAMGA SGTDVAREAA DLILLDDHFA TIVTAVELGR ATYANIRRFL TYHLTDNVAE
LTPFVVWALS GGTIPLALTV LQVLALDIGT DLLPALALGA EPPNPQTMHG PARAGSLVDR
RLLRRVFGVL GPAEAVVEMA GFVTVLMLGG WVFGAEPSPE LLAAASGTAF AAVVLGQLAN
AFACRSETRW AGHLRWTGNP LLLWAVAIEV VLLLIFLGLP PLTSLLGGSF PSPAGWALAA
LAVPAVVAAD TLHKAIQTRS GPR
|
|---|
| |