Gene Sros_4804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4804 
Symbol 
ID8668098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5322148 
End bp5323047 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content71% 
IMG OID 
ProductUniversal stress protein UspA and related nucleotide-binding protein-like protein 
Protein accessionYP_003340370 
Protein GI271966174 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.21431 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTCCA ACGACACCAG CCAGCCGGTC GGTCCGGACG CGCACGAGGG CTCCTCGCCG 
ATCGTCGTCG CGGTGGACGG CTCGGCCGAT GCGGACAGAG CGGTGAGATG GGCCGCTGAC
GATGCCTTCC GCAGGCGGTC GGCGCTGCGG ATCGTGCATG TCGTGGAGCG CGGCCCCTAT
GACATTCACC GGTTCGCCGC CCCTGCGCGG CCCGACACGA TGGTCATGAA CGGGTGGAAA
GTATTGGCCG AGGCCGAGCA GACGGCGCGA AGGCGCCAGC CGTCCGTCGA GGTGAGCACC
GAACTGATCG AGGGAAACCT GACCAGGACC CTGTGCGAGC AGGCTGCGGG CGCCAGCGCG
GTCGTGCTCG GCAGCAGAGG CCTGGGCGGC TTCGCTGGAG CACTGCTCGG GTCGGTGAGC
ACACACGTGG CCGGCCATGC CCACGGCCCG GTGGTCGTCG TCCGTCCCGG CGGGGAGGAA
GTGCACCGTG AGGTCGTCGT CGGCGTCGAC GACTCCCCGC AGTGCGAGCC CGCGCTGGCC
TATGCCTTCG AGCAGGCCAG GCTGCGCGGC TGCGCCCTGC GCGCCGTCCA TGCCTGGCAG
TTGCCGGTGC ACGCCTTCGC GCCTGAGATC TCCTACGACA TGGACGAGAT CCGCCAGGCA
CAGCACCGGG TGGTCCAGGA GCGGCTCGCG GCCTGGCAGG AGAGGTTCCC CGAAGTGGAA
GTGGTCGAGG CCGTCCACAG CGCGGACCCC GTCGACGCTC TCACCAACGC CGCCACCAGA
GCCGACCTGG TTGTCGTGGG CTCACGGGGG AGGGGCGCGG TCGGCTCGAT ATTGCTGGGC
TCCGTCAGCC GTGGCGTGCT GCACCACGCC CACTGCCCCG TGGCGGTGGT CCGATCCTGA
 
Protein sequence
MFSNDTSQPV GPDAHEGSSP IVVAVDGSAD ADRAVRWAAD DAFRRRSALR IVHVVERGPY 
DIHRFAAPAR PDTMVMNGWK VLAEAEQTAR RRQPSVEVST ELIEGNLTRT LCEQAAGASA
VVLGSRGLGG FAGALLGSVS THVAGHAHGP VVVVRPGGEE VHREVVVGVD DSPQCEPALA
YAFEQARLRG CALRAVHAWQ LPVHAFAPEI SYDMDEIRQA QHRVVQERLA AWQERFPEVE
VVEAVHSADP VDALTNAATR ADLVVVGSRG RGAVGSILLG SVSRGVLHHA HCPVAVVRS