Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4705 |
Symbol | |
ID | 8667999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 5230874 |
End bp | 5231764 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | integrase catalytic subunit |
Protein accession | YP_003340294 |
Protein GI | 271966098 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGTTCC GGTTGATTCA TGCGGAGAAG GACCACCACA AGGTCTCCCT GCTGGCTCGG GTGCTGGGTG TGTCGCGCCA GGGCTACTAC GCCTGGGCGG CCCGGCAGCG GCGCGGCCCG TCGACTCGAG CCCGTCGCGA CGCCGAGCTG ACCGAGCGGA TCCGTCGGCA TCACCAAGCG TCTGATGAGA TCTACGGGGC GCCACGTATT CACGCCGACC TGCGCGAACT GGATGGGGTC CGGGTGGGCC GCAAACGAGT GGCCCGGCTG ATGCGCGTGG CCGGGCTGGC CGGGGTGAGC AGGCGTAAGG GCGCCCGCAC CACTGTCACC GATCCGCGCG CCAGATCTGC ATCCGACTTG GTCGGGCGCG ACTTCTGTGC CGAGGAGCCA AACCGGATCT GGACCGCTGA CATCACGTAC GTGCCGACCT GGCAGGGCTT CGTCTATCTG GCGGTGGTGC TGGATGTCTT CTCCCGCCGG ATCGTCGGCT GGGCGATGGC CGAGCACATG CGCACCGAGT TGGTGACCGA TGCGCTGGCG ATGGCGCTGC ACCAGCGCCA CCCCGAGGCC GGGGTGATTC ACCACAGCGA TAAGGGGGGT CAATACACCT CGTTTGCCTT CGGTCAGCGC TGTGAGCAGG CAGGCGTCCG CCCGTCGACG GGCCGGACCG GAACGTGCTT CGACAATGCG ATCACTGAGA GCTTCTTCGC CTCGCTGGAG TGCGAGCTGA TTGACCGGCG CACCTTCCGC ACCAGGTCAG AAGCCGAACG GGCCCTGTTC AGCTACATCG AGGGCTTCTA CAACCCGCGC CGCCGTCACT CCGCCAACGG CCAGCTCAGC CCCGCCGAAA TACGAACGCC GACACGCGCT CAAGAACGCC CAAGACCTTG A
|
Protein sequence | MKFRLIHAEK DHHKVSLLAR VLGVSRQGYY AWAARQRRGP STRARRDAEL TERIRRHHQA SDEIYGAPRI HADLRELDGV RVGRKRVARL MRVAGLAGVS RRKGARTTVT DPRARSASDL VGRDFCAEEP NRIWTADITY VPTWQGFVYL AVVLDVFSRR IVGWAMAEHM RTELVTDALA MALHQRHPEA GVIHHSDKGG QYTSFAFGQR CEQAGVRPST GRTGTCFDNA ITESFFASLE CELIDRRTFR TRSEAERALF SYIEGFYNPR RRHSANGQLS PAEIRTPTRA QERPRP
|
| |