| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_4689 |
|---|
| Symbol | |
|---|
| ID | 8667983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 5212816 |
|---|
| End bp | 5213349 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_003340280 |
|---|
| Protein GI | 271966084 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.284032 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.787552 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGACG CAGTGCTGGC GATGCTCGCC AAGGAGCCGT CGCACGGATA CCACTTGCAC
GCTCGGCTGC GGCACAGTCT TGGCCCGCTG GGCGAGTCGA TGAACCGTGG TCAGATCTAT
GTGACGCTGG CCCGCTTGGA GCGAGCGGGG CTCGTCGTCT GTGAGCGGGC CGACGGCCTG
CCCGAGCGGC CGGAACGCAA GGTCTATGTG CTGACGCCGG CCGGGCAGGA ACGGGTGACC
GCCTGGCTGG CCGAGGTGGG CTGGCCGAAA CCGGACCTGG CGGAGTTCCA TCTCAAGCTT
GCCGCTGCCG CCGCGGCCCG GCTGGCCGAC CCGGTGGAGC TGGTGGCGGC GCAGCGCCGT
GAGTTGCTGC GCCGCTTGCG TGAGGCGCAG CAGGCGGCGC TGGCCGAGCC GGCGGGGTCG
GGCGCCGGGC TGCTGCTGGA AGGGGTCGTG CTGCGGTTGC AGGCGGACCT GCGTTGGCTG
GATGCCTGTG AGCGGGCCTG GTCCAAGGTC GATGACGAAG ATGAGGGTGG ATGA
|
|---|
| Protein sequence | MQDAVLAMLA KEPSHGYHLH ARLRHSLGPL GESMNRGQIY VTLARLERAG LVVCERADGL
PERPERKVYV LTPAGQERVT AWLAEVGWPK PDLAEFHLKL AAAAAARLAD PVELVAAQRR
ELLRRLREAQ QAALAEPAGS GAGLLLEGVV LRLQADLRWL DACERAWSKV DDEDEGG
|
|---|
| |