| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_4673 |
|---|
| Symbol | |
|---|
| ID | 8667967 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 5197494 |
|---|
| End bp | 5198693 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | Signal transduction histidine kinase-like protein |
|---|
| Protein accession | YP_003340269 |
|---|
| Protein GI | 271966073 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.113165 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.377169 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTCGG GCGTGAATGA GCCAGGGGTG GATGAGTGGG GCGTCGATGA GTCGGGCGTG
AAAGGAAAGA GCCGGGGCGC GGCTCTGCGT TACCTCTGCG CCACTGTTCC TGCGCTGTTC
GTCAGCGGGA TCTCGATCCT GTCAGCCGTG AACCGCGAGG TCGCCCCCGA CCTCGCCCAG
ATTGCGCTGG ACCTGGCCCT GTTCGGGGCC GGTCTGGCGC TGATGCGATG GCGACACCGC
TTCCCCTGGC AGGTCGCGCT GGCGACCGCA CTCCTGACCC TCTACTCGAC CACCGCGGCC
GGCCCCGCCT ACGTCGCCTA CGTCTCCCTG TGCACGCATC GCCGTTGGCG CCAGATCGTC
CCGGTCGCTC TCGCCACGTG GCTGTGCCCG GCGGCGCAGA TCCTGTGGTC GGACGCAGAC
AAGCTCAGGG TCGTCTCCGT CACGAGCGTC ACCATGGTGA CCGGCAGCGT GATCGTCGGC
GGACTGACCG TCTTTGGCCT CTACCTGCGC GCGCGGCGCG ACCTGGCCGC CTCGCGGCGA
CGGGCCGCGC TCGAGGCGCA GGCGCACCGC GTCGAGCAGG CCAAACTAGC CGAACGGGTC
AAGATCGCCC ACGAGATGCA TGACGTGCTG GCACACCGGA TCTCTCTGCT GGCCATGCTC
GCGGGCGGCC TGTCGCACCG CACCGACCTC ACCGCCGAGC AGACCCGCGA AACGGCCCAG
GCGATTCAGG AGAACGCACA CCAGTCGCTC AACGAACTGC GCGCCGTACT CGGCACGCTG
CGGCGCGACG GCGGCGTCGA GGACCCGCAG CCGAACCTGG CCGACCTCGA CGCCCTGTTC
GACGAAGTAC GCGTGGCCGG GCAGCAGGTC GAGGTGGCCG ACACTGTCGA CGGGCGCGAG
CTGCTGCCGG CGCAGACAGG GCGGCACGCG TACCGGATCG TGCAGGAGGC GCTGACCAAC
GCGCGCAAGC ACGCGCCGGG CACCCGAGTG AGAGCCGAGC TCGGCGGACG GCCTGGCCAA
GGGTTACGGA TCCGGATGAG CAACCCGGCT CCATACGCCG GATCGTCCAG CCCCGGCTCC
GGCGGGCGGC TGGGCCTGGT CGGGCTGGCC GAGCGTGCCC GGATGGCCGG GGGCACCCTG
AGCCATGCGG TCCAGGACGG ACGCTTCGTC CTGGACGTGC GACTGCCGTG GGAGGCTTGA
|
|---|
| Protein sequence | MLSGVNEPGV DEWGVDESGV KGKSRGAALR YLCATVPALF VSGISILSAV NREVAPDLAQ
IALDLALFGA GLALMRWRHR FPWQVALATA LLTLYSTTAA GPAYVAYVSL CTHRRWRQIV
PVALATWLCP AAQILWSDAD KLRVVSVTSV TMVTGSVIVG GLTVFGLYLR ARRDLAASRR
RAALEAQAHR VEQAKLAERV KIAHEMHDVL AHRISLLAML AGGLSHRTDL TAEQTRETAQ
AIQENAHQSL NELRAVLGTL RRDGGVEDPQ PNLADLDALF DEVRVAGQQV EVADTVDGRE
LLPAQTGRHA YRIVQEALTN ARKHAPGTRV RAELGGRPGQ GLRIRMSNPA PYAGSSSPGS
GGRLGLVGLA ERARMAGGTL SHAVQDGRFV LDVRLPWEA
|
|---|
| |