Gene Sros_4649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4649 
Symbol 
ID8667943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5172199 
End bp5173047 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content71% 
IMG OID 
Producttranscriptional activator 
Protein accessionYP_003340249 
Protein GI271966053 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.12309 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.140815 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTATGG CACGTGATCT CGAGACTGCA CTGCTGCGGT CGTTCGTCAC CGCCGTGCGA 
GCGGGCAGCA TCAGCCGTGC GGCGGTGGCA CTCGGCCATA CCCAGCCCGC GCTCAGCCAG
CAGTTGCGCA AGCTTGAGAG GGCCGTCGGC AGTCCGCTGC TGCACCGGGC GCCGTCCGGC
GTCTCGCCGA CCCGGGCGGG CGAGGAGCTG CTGCCCTATG CCGAGCGCAT TCTCGCGCTG
TCGGCACAGG CACTCGCCGA AACGGGACGT GCGCTCACCG GGCGTTGCGG CGTGGGGCTC
CTCGAAGATC TCGCTGTTTC CCGCCTTCCT CAGGCACTCG CCGACCTCGC GCGGCTGCAC
CCCGACGCGA CGCTGGAGGT GCTCAGTCTT TCCAACGGGG CGATGCGGGA GGCCTACGAC
ACGGGCCGTG TCCAGCTCGT GCTCGACGAG GTCCCGGATC TTCCCTGGCC GCCGCGCTGG
ACGGTGCGTC TGCCGCTGGT CTGGGCGGTC GGGCAGGGTG TCGCCGTCGA CGCCGATCCA
CTGCCTGTGG TGCTGTTCTC GAACACGTGC GCCTGGCGAA CGTCGGTGCT GGAAACGCTG
GAAGGCGCCG GGCGCCGCTG GCGGGTGGCG TTCGAAAGCA ACAGTCTCGC CGGAGTGCTC
GCCGCGCTAC GGGCCGGGCT CGGGGTCGCG GCGCTCATGC CCGCCAACCT CGAGCCGGCC
ATGGCCTGCC ACGACGCGGC CGCGTTGCCT GCTCTGCCGG ACGTCGAACT CGGCCTTGCC
CGCCACCCCG GTACCGAAGG TGATGCGCTC GTCGACGCCG TGGAGACCGC CCTGCGGCGG
ATGATCTGA
 
Protein sequence
MLMARDLETA LLRSFVTAVR AGSISRAAVA LGHTQPALSQ QLRKLERAVG SPLLHRAPSG 
VSPTRAGEEL LPYAERILAL SAQALAETGR ALTGRCGVGL LEDLAVSRLP QALADLARLH
PDATLEVLSL SNGAMREAYD TGRVQLVLDE VPDLPWPPRW TVRLPLVWAV GQGVAVDADP
LPVVLFSNTC AWRTSVLETL EGAGRRWRVA FESNSLAGVL AALRAGLGVA ALMPANLEPA
MACHDAAALP ALPDVELGLA RHPGTEGDAL VDAVETALRR MI