Gene Sros_4646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4646 
Symbol 
ID8667940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5168636 
End bp5169322 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003340246 
Protein GI271966050 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.045555 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.138689 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATCC TGCTCATCGC CGGCCTGTGG CTCGACGGAT CCGCGTGGGA CGACGTCGTG 
CCCGCACTTG AGGCGCTCGG CCACCGCCCC GTACCGATCA CCCTGCCCGG GCAGGGGGAC
GGATCCGCCT CGGCCACTCT CGACGACCAG GCGGCAGCCG TGCTCGCCGC CGTGGACTCG
GCGTCGGGAA AGCCCATGGT GGTGGGACAT TCCGCCGCCT GCACCCTGGC CTGGCTGGCC
GCCGACGCGC GCCCGGAGCG GGTCGCCAAG GTCGCGCTCA TCGGCGGCTT CCCGTCCGCC
GACGGGCAGC CCTACGCCGA CTTTTTCGAG CTGAAGGACG GCGTCATGCC CTTCCCGGGC
TGGGGTCCGT TCGAGGGGCC GGACTCCGCC GACCTCGGCG AGGAGGCCAG GCGGGACTTC
GCGTCCGCGG CGATCCCCGT CCCCGCGGGG GTGACGAAGG GCGTGGTGCG CCTGACGGAC
GAGCGACGGT TCGACGTCCC CGTCCTTGTC GTGTGCCCCG AGTTCACCCC CGCCCAGGCT
CAGGAGTGGA TCGCCGCCGG GGACGTGCCC GAGCTGGCCA AGGCCGAACA CCTCGACCTT
GTGGACATCG ACTCGGGCCA CTGGCCCATG ATCACCGAGC CGGCCGAGCT CGCCCGGCTC
CTGGCCGCGG CGGCCCCCGA GGCCTGA
 
Protein sequence
MDILLIAGLW LDGSAWDDVV PALEALGHRP VPITLPGQGD GSASATLDDQ AAAVLAAVDS 
ASGKPMVVGH SAACTLAWLA ADARPERVAK VALIGGFPSA DGQPYADFFE LKDGVMPFPG
WGPFEGPDSA DLGEEARRDF ASAAIPVPAG VTKGVVRLTD ERRFDVPVLV VCPEFTPAQA
QEWIAAGDVP ELAKAEHLDL VDIDSGHWPM ITEPAELARL LAAAAPEA