Gene Sros_4645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4645 
Symbol 
ID8667939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5167506 
End bp5168507 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content76% 
IMG OID 
Producthelix-turn-helix, type 11 
Protein accessionYP_003340245 
Protein GI271966049 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0418126 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.223314 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGACCG ATCTCAGCCC CACCGCACGG GCTCTGCGCG CCATGGAGAT CCTCCGGACC 
CGCCCCGGCG TGACGGCCGG CGAGCTCGCC GCCTGTCTGG GCGTCACGGA GCGCGCCGCG
CGCCGGTACG TCGGGATCCT CCGCGAGGCG GGCATCCCCG TCGAGTCGGC CCGCGGCCCC
TACGGCGGGT ACCGGCTCGG ACGCGGGACG AAGCTGCCTC CGGTCGCCTT CACCGAGCCC
GAGGCGCTCG GCCTGGTCAT GGCGGTGCTC GACGGCCAGC CGGCGGCCGC CGACGTCGGC
GACCTCGTCG GCGCCGCCCT GGGCAAGGTC ATCCGGGCCC TGCCCGAGAA CGTCGGACGG
CAGGCGGCGG CGCTGCGCGA GCATGCGTCG GCGGCGCCGG ACCGGTTCGC GGCCCGTCCG
GATCCCGCCA TCACCAGCGC GCTCGTGGCC GCCATCGCGG ACCGGCGGCG CGTGGTGGTC
TCCTACCGGA GCGAGTCCGG CAACGAGTGG GAGGCCGAGG TGGACCCCTG GGCGGTCGTC
GTCCGCCACG GGCGCTGGTA CCTGCTGTGC CACTCCCACC GCGCGGACGC CATCCGCACC
TACCGGGTCG ACCGCGTCCG CCAGGTCCAG CGGAGCACGC ACGCGTTCGA GCCGCCCGAC
GGCCTCGACC CGGTGACGGC GCTGGAGGAG AACCTGGGCA CCGGATGGGA GTTCGCCACG
CGCGTCGTGT TCGACGCCCC CCTCGCCGAG GTGGCGCCCT GGATCCGGCC GCCCATGGGA
CGGCTCGAAC CGTCGGGGGA CAGGTGCGTG CTCGTCGGCA GCACGAGCAA TCCGACGATG
TACGCGCAGG AGTGGCTGCC GAACGTGCCG TTCCCCTTCC GCGTTGAGGG CGGGCCGGAA
CTGCGCGCCG CGGTCACGGC GCTCGCTTCT CGTCTCGCCG CCGCCCTGGC GGGCCCGCCC
ATGGACGACG TCACGCCCGG CCCGGGTTCC GACCGGCCGT GA
 
Protein sequence
MPTDLSPTAR ALRAMEILRT RPGVTAGELA ACLGVTERAA RRYVGILREA GIPVESARGP 
YGGYRLGRGT KLPPVAFTEP EALGLVMAVL DGQPAAADVG DLVGAALGKV IRALPENVGR
QAAALREHAS AAPDRFAARP DPAITSALVA AIADRRRVVV SYRSESGNEW EAEVDPWAVV
VRHGRWYLLC HSHRADAIRT YRVDRVRQVQ RSTHAFEPPD GLDPVTALEE NLGTGWEFAT
RVVFDAPLAE VAPWIRPPMG RLEPSGDRCV LVGSTSNPTM YAQEWLPNVP FPFRVEGGPE
LRAAVTALAS RLAAALAGPP MDDVTPGPGS DRP