| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_4644 |
|---|
| Symbol | |
|---|
| ID | 8667938 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 5166192 |
|---|
| End bp | 5167385 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | alkaline D-peptidase |
|---|
| Protein accession | YP_003340244 |
|---|
| Protein GI | 271966048 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00635481 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.333853 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACACCG TGGAGGACGT ACGGAAGAAA CGTCAGAAAG GCAGTGCAAT GGCAGCGCAC
GAGAAAGTGC AGCAGGTGCT CGACTGGGCG GTGGCCGAGG CCGGCATCCC CGGCATCGTC
GCCGACATCA AGGACGGGGA CCGGACCTGG TTCGGCACCG CCGGCGTCGC CGACCTCAAG
ACCGGTGCCC TGCGCGGGCC GGGCGAATAC CTGCACACCG GCAGCAGCGG CAAGGCCTTC
ACCGCCGCAG TGGTCCTGTC CCTGGAGGCC GAGGGCAGGC TGAGCATCGA CGACCCGGTG
GACAAGTGGC TGCCGGGCGT GCTGAACGTC AACGGCTACG ACGGCAGCAA GATCACCATC
AGGCACCTGC TCAGCAACAC CAGTGGTCTG TTCGTGACCG GCCTGGCGCC GGAGATCAGC
CACCGCTACG CCACCCGTTC CGGGTTCGCC GAGCATCGCT TCGACGAATT CAGCACCGAA
GAGCTGTTGA GGGTGGCGGT GTCCCAGCCG CCGATCGGTG CGCCCGGCGA ACGCTTCGGG
TACGCCAACG GCGGCTTCTA CCTCGCCGGG GCGATCATCG AGAAGGTCAC CGGCAACAGC
TATGCCGAGG AGGTCGAGCT CAGGGTCGCT CAACCGCTAG GCCTGACCGA CACCCGCGTG
CGCCCCTCCA CGGACACGGG ATACCCCGAT CCGCACCCGC GAGGGTACTC GAACCTCTTC
TTCAAGGACG GCACCGACCC GGCAGCCGTC ACCCCGGAGA ACTGGGAATC TCTGATCGAG
GAGCCCGGAC TCGAGCCCCT CGACGTCACC GAGTTCAACA CCTCGCTCGG CTGGTCGGCC
GGCAATGTCG TCTCCACCAC CGGCGACATG ATCCGGTTCG TCAACGCGCT GGCGAGCGGC
AGCCTGCTGC CGCCGGCCCA GCACCGGCAG ATGTGGACCA CGGTCTCCGT CGAGGGTGGT
CACTGGATGC CGCACGCCCG ATATGGCCTC GGCCTGTTCG AGTTCGACAA GGACGCCGCG
GGCGGCCGGA CGCTGCGCGG TGTGGGTGGC AGCCTCTGGG GGTCCTACAC CTGCGTGGTG
GGTACCCCCG ACGGCCGGCA CACCATCGCC GTCCACACCA ACACCGAATG GAAGACCTGG
GACCTCATGT TCAAGGTCAT CGAAGCGGAG TTCGGCGTCT CCATCGGTGC GTAA
|
|---|
| Protein sequence | MDTVEDVRKK RQKGSAMAAH EKVQQVLDWA VAEAGIPGIV ADIKDGDRTW FGTAGVADLK
TGALRGPGEY LHTGSSGKAF TAAVVLSLEA EGRLSIDDPV DKWLPGVLNV NGYDGSKITI
RHLLSNTSGL FVTGLAPEIS HRYATRSGFA EHRFDEFSTE ELLRVAVSQP PIGAPGERFG
YANGGFYLAG AIIEKVTGNS YAEEVELRVA QPLGLTDTRV RPSTDTGYPD PHPRGYSNLF
FKDGTDPAAV TPENWESLIE EPGLEPLDVT EFNTSLGWSA GNVVSTTGDM IRFVNALASG
SLLPPAQHRQ MWTTVSVEGG HWMPHARYGL GLFEFDKDAA GGRTLRGVGG SLWGSYTCVV
GTPDGRHTIA VHTNTEWKTW DLMFKVIEAE FGVSIGA
|
|---|
| |