Gene Sros_4626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4626 
Symbol 
ID8667920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5148207 
End bp5149253 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content70% 
IMG OID 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003340228 
Protein GI271966032 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.804772 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACCG CAACCCGGCC GTCATCGCGC CGCTCCCTCC GATCCGCGCG CACGGTGGCG 
ACCGTCACGC TCACCCTCCT GCTCACGATC GGCGCCGCGG CCTGTTCCAC GCCGACCGCG
ACTTCCACGC CGACCGCGAC CGGCGTTCCC CCCTACGCCG TCGCCACCCA GGACGACCCG
GAGTTCGAAA ACACCTTCCG GCACGAGTTC GCCGATGTCG ACGGTGTCCG CATGCACTAC
GTGACCGGCG GCAGCGGCAC ACCGGTGGTG CTGATCCACG GCTGGCCCCA GACCTGGTAC
GGCTGGTGGC CGATCATGCC GGAACTCGCC AAACACCACA CCGTCTACGC CGTCGACCTT
CCCGGACTGG GCGACAGCAC CGGCTCACCG ACCGGCTACG ACAAAGCCAC CCTGGCGCGG
TACGTGCACA CGTTGATCGC CGACCGGCTC AACATCCGGG ACACCGCCGT CGTCGGCCAC
GATTTCGGCG CCGCAGTAGC GTTCCAGTAC GCCAGCCAAT TCCCCGCCGA CACCGCACGC
CTCGGCTACC TCGACCTGCC GCTACCCGGA CCCGCTGTCG ATGCGGCCAC GTACCGCTCA
CTGAGCTGGC ACATCGCCTT CCACTCCCAG CGACGGGTCC CCGAGGCGGT GGTGGGCGAC
GACGTCCGCG AGTACCTGGC ACTGTTCTAC CCCCAGGTCG CGTTCGGCGG AACGGCGTTC
GGCGGCACCT CAGATCGGTC CCCGTTCACC GACACCGAGA TCAACGAGTA CGCGCGGACC
TACCGCCGGC CCGAGGCCCT GTCGGGCGGC TTCGAGCTCT ACCGCGCCCT CGGCAAAGAC
GTCCGCGACA CCGCGGCGGC GGCACCGGTA CGTGTCCCGA CCCTGCTCAT GACCGCCCAG
GGGCAGCTCG ACGCGATCCG GGCCACCGCG GCCCCGCGCA TGACCAACAT CGTGCGCGCG
CTGGACGTGC CGCACGCGGG GCACTGGCTC GTCGAGGAGA ACCCTCGGTT CGTCACTGCG
GAGCTAGTGC GTTTCCTCGA CGGATGA
 
Protein sequence
MITATRPSSR RSLRSARTVA TVTLTLLLTI GAAACSTPTA TSTPTATGVP PYAVATQDDP 
EFENTFRHEF ADVDGVRMHY VTGGSGTPVV LIHGWPQTWY GWWPIMPELA KHHTVYAVDL
PGLGDSTGSP TGYDKATLAR YVHTLIADRL NIRDTAVVGH DFGAAVAFQY ASQFPADTAR
LGYLDLPLPG PAVDAATYRS LSWHIAFHSQ RRVPEAVVGD DVREYLALFY PQVAFGGTAF
GGTSDRSPFT DTEINEYART YRRPEALSGG FELYRALGKD VRDTAAAAPV RVPTLLMTAQ
GQLDAIRATA APRMTNIVRA LDVPHAGHWL VEENPRFVTA ELVRFLDG