Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4606 |
Symbol | |
ID | 8667900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 5125099 |
End bp | 5125959 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | Viomycin kinase |
Protein accession | YP_003340210 |
Protein GI | 271966014 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.259314 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0226508 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGGATCT TGCAGGCGAA TCGCGTGCTG CTGAGCCGGC TGCTGCCGGG CGTCGAACCG GAAGGTCTCA CCGTCCGGCA CGGGCAATTC CATCAGGTAG TGATCGCCTC AGACCGTGTG GTGTGCCTGC CTCGGACCGC GGCGGCTGCC GCGCGGCTGC CGCGCAGGGC CGCTGTCATG CGCGTACTGG CCGGGCTTGA TCTCGGCTGC CGCACGCCTC GGCCGTTGTG TGAGGGCAGC GCTGAAGGCG CGGTCGAGCT GCCGTTCTTG GTTCTCAGCC GTGTCCCCGG AGCACCGCTG GAGGCGGATG CGCTCGAAGA TTCCAAGGTG GCCGAGGTCG TCGCGGCGCA GTACGTCACG CTGCTGTCCG GACTGGCCAG CGCCGGTGCC GACGAGAAGG TGCGAGCGGC CCTGCCGGCA CCACAAGGTC GGTGGCGGCA GTTCGCGGCG GATGTCCGTG CCGAGTTGTT CCCTCTCATG TCCGATGGCG GGTGTCGACA GGCCGAGCGG GAGCTCGCGG CGCTCGACAG CCTTCCCGAC ATCACCGAAG CGGTGGTGCA CGGGGACCTC GGCGCCGAGA ACGTCCTATG GGTCCGCGAC GACGGACTGC CGCGGCTCAG CGGGGTGATC GATTGGGACG AGGTCTCGAT CGGCGATCCT GCCGAGGACC TTGCGGCCAT CGGCGCCGGC TACGGCAAGG ACTTCCTTGA CCAGGTGCTC ACGCTCGGCG GCTGGTCGGA CAGGAGGATG GCCACCCGCA TCGCCACTAT CCGCGCCACC TTCGCCCTGC AGCAGGCCCT GTCCGCGTGC CGGGACGGCG ACGAAGAAGA ATTGGCGGAC GGCCTGACCG GCTACCGCTG A
|
Protein sequence | MGILQANRVL LSRLLPGVEP EGLTVRHGQF HQVVIASDRV VCLPRTAAAA ARLPRRAAVM RVLAGLDLGC RTPRPLCEGS AEGAVELPFL VLSRVPGAPL EADALEDSKV AEVVAAQYVT LLSGLASAGA DEKVRAALPA PQGRWRQFAA DVRAELFPLM SDGGCRQAER ELAALDSLPD ITEAVVHGDL GAENVLWVRD DGLPRLSGVI DWDEVSIGDP AEDLAAIGAG YGKDFLDQVL TLGGWSDRRM ATRIATIRAT FALQQALSAC RDGDEEELAD GLTGYR
|
| |