| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_4603 |
|---|
| Symbol | |
|---|
| ID | 8667897 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 5121469 |
|---|
| End bp | 5122353 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_003340207 |
|---|
| Protein GI | 271966011 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0215938 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTGC TGTCACTGCG CTACTTCCAG GCCGTGGCCC GCCACGAGCA CATCAGCAAG
GCAGCCGAGG AGCTCCGCAT CGCCCAGCCC TCGCTCAGCC GGACCATCGC GCGGCTGGAG
GCTGACCTGG GCGTGCCGCT GTTCGACCGG CACGGCAGAC GGATCCGCCT CAACCGGTTC
GGCGCCGCGT TCCTGCGCCG GGTGGACAGG GCCCTGGCCG AGCTGGACGA CGCCAGACGC
GAACTCGCCG ACGCCGCCGG CCTGGCCCGC GGCAGCGTCT CGCTCGCCTC GGAGACACTG
CTCACGATCA CCGAACCGGT CAAGAGCTTC ATCGCCGAGC ATCCAGGCGT CGCCGTACGC
CTGTTCCAGG CGGCCCCGGA GGTCATGGTC GAGCGGCTGA GCGAGGGACA GGTCGACTTC
TGCCTGGCCT CCGAGGTGCT CGACGGCCCG GGTCTGGTCC ATGACGAGCT GGTCCGCGAG
GAAGTCATGC TCGCCGTGCC GCTCGGGCAC CGGCTCGCCG GCCGGCGGGA GGTGACCGTG
GCCGACCTCG CGGGCGAACC CGTCGTCACC ACCCGGCCGG GGATCTGGCA GCGCACGCTG
GCCGAGCGGC TGTTCTCCGA GGCCGGGTTG GAGCTGGTGG TCGCCTGCGA GATCGACGAG
GCCACCACGG CCATCGAGAT GGTCAGCGCC GGGCTCGGCG TGGGGTTCGG GCCCGCGTGG
TATCTCCGCT CGCCGCTGGC GTCGCGAGCG CCGTTTTCTC CCGTACGGCT GGCCGCTCCC
GGCGCCGAGC GGGTCCTGCG GCTGTACTGG CGGCAGGGGG CCTACGTGTC CGAGGCGGCC
CGCCGCTTCC GCGACCACCT GGCCGCCTCG CTGATGGCGA CCTAG
|
|---|
| Protein sequence | MDLLSLRYFQ AVARHEHISK AAEELRIAQP SLSRTIARLE ADLGVPLFDR HGRRIRLNRF
GAAFLRRVDR ALAELDDARR ELADAAGLAR GSVSLASETL LTITEPVKSF IAEHPGVAVR
LFQAAPEVMV ERLSEGQVDF CLASEVLDGP GLVHDELVRE EVMLAVPLGH RLAGRREVTV
ADLAGEPVVT TRPGIWQRTL AERLFSEAGL ELVVACEIDE ATTAIEMVSA GLGVGFGPAW
YLRSPLASRA PFSPVRLAAP GAERVLRLYW RQGAYVSEAA RRFRDHLAAS LMAT
|
|---|
| |