Gene Sros_4600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4600 
Symbol 
ID8667894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5113809 
End bp5116700 
Gene Length2892 bp 
Protein Length963 aa 
Translation table11 
GC content74% 
IMG OID 
ProductATPase-like protein 
Protein accessionYP_003340204 
Protein GI271966008 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0703519 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATGG ACGGCGGTAC GGCCGCGGGA CGGGTGGTTT CTCCGGTCCT GGTGGGGCGT 
GAGGCCCAGT TACGGCGTCT GGTGACCGCG GTGAGCCGTC CGCCCGCCGT GGCGGTCCTG
GAAGGGGAAG CAGGCATCGG CAAGACCCGG CTGGTGGCGG AGATGGCGGC CCACCCCGAT
ATGGCGGGGC GCCTGCTCCT CGGCGGGGGT GCCCGGCGGA TCCGGGAGCC GTTCCCCCTG
GGGCCGCTGG TGGAGGCGCT GCGCGGCACG GGTGAACTGC TGGCGCGGGC CGAGCTGTCG
CCGGTCACGG GTGCCCTGCG GGGGTTGCTG CCGGAGCTGG CGGGGGTGCT GCCGCCTGCT
CTGGAACCGC TGGACGACCG GGCGGCCGAA CGACACCGGC TGTTCCGCGG TCTCGCGGAG
GTGCTGAGCG CGCTGGGACC GCTGGTGCTG GTGATGGAGG ACCTGCACTG GGCGGACGAG
CAGACGGTCG AGTTCCTCGC CTACCTGCTG TCGGCCCTGC CGGCCCGGAT GTCGGTGGTG
CTCGTCTACC GGGGTGAGGA GGTCGGAGCC GGGATCCGGG AGGCGACGGG CCGGCTCGCG
GACTCGGTCT TCCACGACCA TGTCGTGCTG GAGCCCCTGG ACGCCGAACA GACCGGCGTG
CTCGCGGCTT CGATCCTGGA CGCGGAGGAC GTCACCCCCG ACTTCGGGGC GCACCTGCAT
GAGCTGTCGT CGGGCCTGCC GCTGGCGGTG CAGGAACTGC TGGCGTTGCT GCGGGAACGA
GGTGCGCTGA TCCAGCTGCG CAGCGGGCGA TGGGCGCGGA AGGCGCTGGC GGAGCTGGAT
GTGCCGCCGG GGGTCCGTGA CTCGGTGCGC GAGCGGGTGG GCCGGCTGTC CGCGGCGGCG
CGCGGGGTGG CCGAGGCGGC GGCGGTGCTG CAGGTGCCGG CGCGGGTGGC GGTGCTGGCC
CAGGTGAGCG GGCTGTCCCG GGCCGAGACC GTGGCCGGGC TGGACGAGCT GCTGGTCTCG
GGGCTGCTGG CCGAGCAGGA CGGGACGGTG GCCTTCCGGC ATGTGCTCGC CGCGCAGGCG
GTGTACGGGG GGATCCCCCT GGGGCGGCGG CAGGACCTGC ACGCCCGGGC GGCGGCCGCC
GTACGCACGG TGGAGCCGGT GCCACTGGGG CAGGAGGCTC ACCATCTGCG CCATGCCGGT
CTGCTGCGGG AATGGGTGGA CGCCGCGGAT CAGGCCGCCG GCCAGGCGTC GGAGCTGGGC
GACGACGCCG AGGCCGTGCG GATTCTGGAG GACGTGCTGC GGAACGCGCC GCTGGAGCCC
GAACGCCGGG GGCACCTGGC GGTGCGGCTG GGCTGGGCCG CCGGCCAGGT GCTGCGTCCC
CCGGAGGTGA TCGACCTGCT GTCGGAGGCT CTGGAGTCCG AGCAGCCGGG GCCGTTGCGC
GGGCAGCTGC ACTTCCTGAT CAGCCTGCTG CAGGAGAGGC TCGGCGACGA CCCCGGGGCG
CAGCGGCGCG CTCTCACGGC AGCGGTCGAC GACCTCGGCG ACCAGCCCGA ACTCGCGGCG
TGGGTGATGG CGGCGCTCGG GAGGCCGATG GACGCGGCTG TGACGCTGGC CGAGCACACC
ATGTGGCTGG ACCGGGCCCT GGAGGTGGTG CCCTCCATAG GCGATCCGGT GGAGGAGATC
TTCGTGCTCG GCAAGATCGC GGCCTCGCTG AGCGGATTCG GTGATCCGCG CTGGGCCGCG
CTGACCGACG GTATCCGCCG GCGGACCGGC GGCCGGCCGC GGCATCGCCA GGAGGTGAAC
GCCTACCGGT CCATCGCGGA GAACGTGTGT TGCGCCGGGC ATTTCGAGCT CGCCGACCAG
CTGCTGGCCG CCGCGTCGCA GGGGGCGGCC GGTGAGGAAT CCTCCCGGGA ACCACTGGCC
CGGTGCCGGT TGGTCTCGCT GCTGCTGGCG TACTGCCGGG GCACATGGGA CGGGCTGGAC
CAGGAGACCG CGCTGCTTCT CGACGAGTAC GGCGGGCGCC CGTCCGACCG GATCACCGCC
GAGACGGTCG CGGCCTGCCT GGCGCTCACG CACGGCGACC TCGACACCGC CCGCCGCGAA
CTCCACGACG TCGTCCAGCG CACCCTGGCT CTGGGCGGCT ACGAACTGCT CCCCCTGTCC
ATGACCGGAT TTCTCCGGCT GTCCACCGCA CGCGGCGAGG CCGAGGCGGC GCTCGCGGTG
ACCGGCGCGG CGGTCACCGT ATGGGAGACC AAGGGGCTCT GGCCGCTGGC GGTACGGGCG
GTGCCCGCGC TGGCCGAGGC GATGGCCGGC ATCGGCGGGC ACGACGAGGC CGCCGACCTG
ATCGCCCGGC TCTCCGTGCT GCTCGACGGC CTGGACGCTC CGATGGCTCC GGCCGCGCTG
GCGCACGCGC GCGGGCACCT GGAGGCCGGC CGTACGGCCG CCGCCGAACA GTTCCTGGCG
GCCGCGTCCG CCTACGACCG GCTGGGAGCC CCGTACGAGG CGGCCCAGGC CCGTGAACAG
GCGGCCGGCT GCCTCTTCGC CGCCGCGGAC CCGCGGGCCG AGGAACCGCT ACGCGCGGCG
ATCACGACAT TTCAGACGTT GGGCGCCCGA TGGGATCTGG ACCGCGCCGC GCAGCTGGCC
CGCAAGTACG GGGTGGCGGT GAAGGGGCGA TACCCCGGTG GCCCGCAGGG ATACGGCGGC
GGGCTGTCTC CCCGGGAGCG GGAGATCGCC GAAATGGCCG CCGCCGGGCT GACCAACCGG
GAGATCGGCC AGCAGCTTTT CGTGTCCCCC CGAACGGTGG AGAAGCATCT CGGCGCCGTG
CTGCGCAAGC TCGGGCTCCG CTCTCGCGCC GCCCTCGGGA TGCACCTGGG CGTCGACCGC
GACGGTCTCT GA
 
Protein sequence
MAMDGGTAAG RVVSPVLVGR EAQLRRLVTA VSRPPAVAVL EGEAGIGKTR LVAEMAAHPD 
MAGRLLLGGG ARRIREPFPL GPLVEALRGT GELLARAELS PVTGALRGLL PELAGVLPPA
LEPLDDRAAE RHRLFRGLAE VLSALGPLVL VMEDLHWADE QTVEFLAYLL SALPARMSVV
LVYRGEEVGA GIREATGRLA DSVFHDHVVL EPLDAEQTGV LAASILDAED VTPDFGAHLH
ELSSGLPLAV QELLALLRER GALIQLRSGR WARKALAELD VPPGVRDSVR ERVGRLSAAA
RGVAEAAAVL QVPARVAVLA QVSGLSRAET VAGLDELLVS GLLAEQDGTV AFRHVLAAQA
VYGGIPLGRR QDLHARAAAA VRTVEPVPLG QEAHHLRHAG LLREWVDAAD QAAGQASELG
DDAEAVRILE DVLRNAPLEP ERRGHLAVRL GWAAGQVLRP PEVIDLLSEA LESEQPGPLR
GQLHFLISLL QERLGDDPGA QRRALTAAVD DLGDQPELAA WVMAALGRPM DAAVTLAEHT
MWLDRALEVV PSIGDPVEEI FVLGKIAASL SGFGDPRWAA LTDGIRRRTG GRPRHRQEVN
AYRSIAENVC CAGHFELADQ LLAAASQGAA GEESSREPLA RCRLVSLLLA YCRGTWDGLD
QETALLLDEY GGRPSDRITA ETVAACLALT HGDLDTARRE LHDVVQRTLA LGGYELLPLS
MTGFLRLSTA RGEAEAALAV TGAAVTVWET KGLWPLAVRA VPALAEAMAG IGGHDEAADL
IARLSVLLDG LDAPMAPAAL AHARGHLEAG RTAAAEQFLA AASAYDRLGA PYEAAQAREQ
AAGCLFAAAD PRAEEPLRAA ITTFQTLGAR WDLDRAAQLA RKYGVAVKGR YPGGPQGYGG
GLSPREREIA EMAAAGLTNR EIGQQLFVSP RTVEKHLGAV LRKLGLRSRA ALGMHLGVDR
DGL