Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4600 |
Symbol | |
ID | 8667894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 5113809 |
End bp | 5116700 |
Gene Length | 2892 bp |
Protein Length | 963 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | ATPase-like protein |
Protein accession | YP_003340204 |
Protein GI | 271966008 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0703519 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGATGG ACGGCGGTAC GGCCGCGGGA CGGGTGGTTT CTCCGGTCCT GGTGGGGCGT GAGGCCCAGT TACGGCGTCT GGTGACCGCG GTGAGCCGTC CGCCCGCCGT GGCGGTCCTG GAAGGGGAAG CAGGCATCGG CAAGACCCGG CTGGTGGCGG AGATGGCGGC CCACCCCGAT ATGGCGGGGC GCCTGCTCCT CGGCGGGGGT GCCCGGCGGA TCCGGGAGCC GTTCCCCCTG GGGCCGCTGG TGGAGGCGCT GCGCGGCACG GGTGAACTGC TGGCGCGGGC CGAGCTGTCG CCGGTCACGG GTGCCCTGCG GGGGTTGCTG CCGGAGCTGG CGGGGGTGCT GCCGCCTGCT CTGGAACCGC TGGACGACCG GGCGGCCGAA CGACACCGGC TGTTCCGCGG TCTCGCGGAG GTGCTGAGCG CGCTGGGACC GCTGGTGCTG GTGATGGAGG ACCTGCACTG GGCGGACGAG CAGACGGTCG AGTTCCTCGC CTACCTGCTG TCGGCCCTGC CGGCCCGGAT GTCGGTGGTG CTCGTCTACC GGGGTGAGGA GGTCGGAGCC GGGATCCGGG AGGCGACGGG CCGGCTCGCG GACTCGGTCT TCCACGACCA TGTCGTGCTG GAGCCCCTGG ACGCCGAACA GACCGGCGTG CTCGCGGCTT CGATCCTGGA CGCGGAGGAC GTCACCCCCG ACTTCGGGGC GCACCTGCAT GAGCTGTCGT CGGGCCTGCC GCTGGCGGTG CAGGAACTGC TGGCGTTGCT GCGGGAACGA GGTGCGCTGA TCCAGCTGCG CAGCGGGCGA TGGGCGCGGA AGGCGCTGGC GGAGCTGGAT GTGCCGCCGG GGGTCCGTGA CTCGGTGCGC GAGCGGGTGG GCCGGCTGTC CGCGGCGGCG CGCGGGGTGG CCGAGGCGGC GGCGGTGCTG CAGGTGCCGG CGCGGGTGGC GGTGCTGGCC CAGGTGAGCG GGCTGTCCCG GGCCGAGACC GTGGCCGGGC TGGACGAGCT GCTGGTCTCG GGGCTGCTGG CCGAGCAGGA CGGGACGGTG GCCTTCCGGC ATGTGCTCGC CGCGCAGGCG GTGTACGGGG GGATCCCCCT GGGGCGGCGG CAGGACCTGC ACGCCCGGGC GGCGGCCGCC GTACGCACGG TGGAGCCGGT GCCACTGGGG CAGGAGGCTC ACCATCTGCG CCATGCCGGT CTGCTGCGGG AATGGGTGGA CGCCGCGGAT CAGGCCGCCG GCCAGGCGTC GGAGCTGGGC GACGACGCCG AGGCCGTGCG GATTCTGGAG GACGTGCTGC GGAACGCGCC GCTGGAGCCC GAACGCCGGG GGCACCTGGC GGTGCGGCTG GGCTGGGCCG CCGGCCAGGT GCTGCGTCCC CCGGAGGTGA TCGACCTGCT GTCGGAGGCT CTGGAGTCCG AGCAGCCGGG GCCGTTGCGC GGGCAGCTGC ACTTCCTGAT CAGCCTGCTG CAGGAGAGGC TCGGCGACGA CCCCGGGGCG CAGCGGCGCG CTCTCACGGC AGCGGTCGAC GACCTCGGCG ACCAGCCCGA ACTCGCGGCG TGGGTGATGG CGGCGCTCGG GAGGCCGATG GACGCGGCTG TGACGCTGGC CGAGCACACC ATGTGGCTGG ACCGGGCCCT GGAGGTGGTG CCCTCCATAG GCGATCCGGT GGAGGAGATC TTCGTGCTCG GCAAGATCGC GGCCTCGCTG AGCGGATTCG GTGATCCGCG CTGGGCCGCG CTGACCGACG GTATCCGCCG GCGGACCGGC GGCCGGCCGC GGCATCGCCA GGAGGTGAAC GCCTACCGGT CCATCGCGGA GAACGTGTGT TGCGCCGGGC ATTTCGAGCT CGCCGACCAG CTGCTGGCCG CCGCGTCGCA GGGGGCGGCC GGTGAGGAAT CCTCCCGGGA ACCACTGGCC CGGTGCCGGT TGGTCTCGCT GCTGCTGGCG TACTGCCGGG GCACATGGGA CGGGCTGGAC CAGGAGACCG CGCTGCTTCT CGACGAGTAC GGCGGGCGCC CGTCCGACCG GATCACCGCC GAGACGGTCG CGGCCTGCCT GGCGCTCACG CACGGCGACC TCGACACCGC CCGCCGCGAA CTCCACGACG TCGTCCAGCG CACCCTGGCT CTGGGCGGCT ACGAACTGCT CCCCCTGTCC ATGACCGGAT TTCTCCGGCT GTCCACCGCA CGCGGCGAGG CCGAGGCGGC GCTCGCGGTG ACCGGCGCGG CGGTCACCGT ATGGGAGACC AAGGGGCTCT GGCCGCTGGC GGTACGGGCG GTGCCCGCGC TGGCCGAGGC GATGGCCGGC ATCGGCGGGC ACGACGAGGC CGCCGACCTG ATCGCCCGGC TCTCCGTGCT GCTCGACGGC CTGGACGCTC CGATGGCTCC GGCCGCGCTG GCGCACGCGC GCGGGCACCT GGAGGCCGGC CGTACGGCCG CCGCCGAACA GTTCCTGGCG GCCGCGTCCG CCTACGACCG GCTGGGAGCC CCGTACGAGG CGGCCCAGGC CCGTGAACAG GCGGCCGGCT GCCTCTTCGC CGCCGCGGAC CCGCGGGCCG AGGAACCGCT ACGCGCGGCG ATCACGACAT TTCAGACGTT GGGCGCCCGA TGGGATCTGG ACCGCGCCGC GCAGCTGGCC CGCAAGTACG GGGTGGCGGT GAAGGGGCGA TACCCCGGTG GCCCGCAGGG ATACGGCGGC GGGCTGTCTC CCCGGGAGCG GGAGATCGCC GAAATGGCCG CCGCCGGGCT GACCAACCGG GAGATCGGCC AGCAGCTTTT CGTGTCCCCC CGAACGGTGG AGAAGCATCT CGGCGCCGTG CTGCGCAAGC TCGGGCTCCG CTCTCGCGCC GCCCTCGGGA TGCACCTGGG CGTCGACCGC GACGGTCTCT GA
|
Protein sequence | MAMDGGTAAG RVVSPVLVGR EAQLRRLVTA VSRPPAVAVL EGEAGIGKTR LVAEMAAHPD MAGRLLLGGG ARRIREPFPL GPLVEALRGT GELLARAELS PVTGALRGLL PELAGVLPPA LEPLDDRAAE RHRLFRGLAE VLSALGPLVL VMEDLHWADE QTVEFLAYLL SALPARMSVV LVYRGEEVGA GIREATGRLA DSVFHDHVVL EPLDAEQTGV LAASILDAED VTPDFGAHLH ELSSGLPLAV QELLALLRER GALIQLRSGR WARKALAELD VPPGVRDSVR ERVGRLSAAA RGVAEAAAVL QVPARVAVLA QVSGLSRAET VAGLDELLVS GLLAEQDGTV AFRHVLAAQA VYGGIPLGRR QDLHARAAAA VRTVEPVPLG QEAHHLRHAG LLREWVDAAD QAAGQASELG DDAEAVRILE DVLRNAPLEP ERRGHLAVRL GWAAGQVLRP PEVIDLLSEA LESEQPGPLR GQLHFLISLL QERLGDDPGA QRRALTAAVD DLGDQPELAA WVMAALGRPM DAAVTLAEHT MWLDRALEVV PSIGDPVEEI FVLGKIAASL SGFGDPRWAA LTDGIRRRTG GRPRHRQEVN AYRSIAENVC CAGHFELADQ LLAAASQGAA GEESSREPLA RCRLVSLLLA YCRGTWDGLD QETALLLDEY GGRPSDRITA ETVAACLALT HGDLDTARRE LHDVVQRTLA LGGYELLPLS MTGFLRLSTA RGEAEAALAV TGAAVTVWET KGLWPLAVRA VPALAEAMAG IGGHDEAADL IARLSVLLDG LDAPMAPAAL AHARGHLEAG RTAAAEQFLA AASAYDRLGA PYEAAQAREQ AAGCLFAAAD PRAEEPLRAA ITTFQTLGAR WDLDRAAQLA RKYGVAVKGR YPGGPQGYGG GLSPREREIA EMAAAGLTNR EIGQQLFVSP RTVEKHLGAV LRKLGLRSRA ALGMHLGVDR DGL
|
| |