Gene Sros_4596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4596 
Symbol 
ID8667890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5109597 
End bp5110511 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content68% 
IMG OID 
Productpolar amino acid ABC transporter inner membrane protein 
Protein accessionYP_003340200 
Protein GI271966004 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0614805 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGTGC GGACCGAACC GATCACCGAC GCGTCGGGCA GGCCGATCCC CGTCGCGCGG 
ACCTGGCACT GGGGCCGCTG GCTGGCCGCG GCGGTCGCGC TGGCGGTCGC GGCCCGGCTG
GCCTACCTCA TCGTGGCCAA CCCGAACCTG GACTGGGGCA AGGTCGCCGA GTACGTGTTC
CACGAGCGGA TCCTGAGCGG GGTCTGGGTC ACCATCGAGA TCTCGGTCCT GGCCACGGCC
CTCGGGCTGG TGCTGGGCGT GCTGGTCGCG ATCATGCGGC TGGCGCACAA CCCGGTGCTG
AGCGGGCTGG CCACGTTCTA CATCTGGTTC TTCCGCGGCA CGCCGGTGCT GGTGCAGCTC
ATCTTCTGGT ACAACCTGGC GTTCCTGTTC CCCGAGCTGG TGCTGAAGGT CCCGTTCACC
ATGATCGGCG TCAAGTGGGA CACCAACCAG GTGATGACCG GCTTCACCTC GGCCATGCTC
GGGCTGGGGC TGAACCTGGC CGCCTACTTC GCCGAGACCG TGCGCGCCGG GATCCAGGCC
GTCGACAAGG GCCAGACCGA GGCGGCGTAC GCGCTGGGCA TGACCCCGGC CAAGCGGATG
CGGGTCATCG TGCTGCCCCA GGCGCTGCGC ATCATCATCC CGCCCACCGG CAACGAGTTC
ATCTCCATGC TGAAGACCAC CTCGCTGGTC TACGTGGTCG CCGGGCACGA CCTGATGACC
AACGCCAGCC AGATATACAA GGCGAACAAT CTGATCATGG AGCTGCTGAT CGTGGCGAGC
CTGTGGTACA TGCTCATGAC CGCCGTGGCG ACCTTCCTGC AGGGCAGGCT GGAGCGCCGC
TTCGGCTCCG AGGCCGTACG GCTGGTGCGC GGCGGCGGCC TGGCCGCCAG GATCCTGCCG
AAGGCGGCCG CATGA
 
Protein sequence
MTVRTEPITD ASGRPIPVAR TWHWGRWLAA AVALAVAARL AYLIVANPNL DWGKVAEYVF 
HERILSGVWV TIEISVLATA LGLVLGVLVA IMRLAHNPVL SGLATFYIWF FRGTPVLVQL
IFWYNLAFLF PELVLKVPFT MIGVKWDTNQ VMTGFTSAML GLGLNLAAYF AETVRAGIQA
VDKGQTEAAY ALGMTPAKRM RVIVLPQALR IIIPPTGNEF ISMLKTTSLV YVVAGHDLMT
NASQIYKANN LIMELLIVAS LWYMLMTAVA TFLQGRLERR FGSEAVRLVR GGGLAARILP
KAAA